RPSBLAST alignment of GI: 254780147 and protein with PDBid: 1mms
>1mms_A Protein (ribosomal protein L11); RNA-protein complex, RNA, ribosome, translocation, thiostrepton; 2.57A {Thermotoga maritima} SCOP: a.4.7.1 d.47.1.1 PDB: 1mvr_L 1oln_A* 1giy_L 1mj1_L* 1ml5_l* 1yl3_L 2b66_K 2b9n_K 2b9p_K 2jq7_A* 2k3f_A 1eg0_K 1jqm_A 1jqs_A 1jqt_A 1r2w_A 1r2x_A 487d_L 1pn8_L 1pn7_L Length = 140
Score = 159 bits (405), Expect = 1e-40
Identities = 72/141 (51%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
Query: 2 AKVVSRIVKLQIESGSAKPSPPVGPAIGQAGIPIMAFCKAFNAATEGMEKGIPIPTTVTC 61
AK V+ +KLQ+ +G A P+PPVGPA+GQ G+ IM FCK FNA T G+ +P +T
Sbjct: 1 AKKVAAQIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADK-AGMILPVVITV 59
Query: 62 YKDKSFTFTMSQPPVSFFLKKEVGIKSGSKLPGKESCGSITRENIRKIAQLKMQDMGAID 121
Y+DKSFTF + PP SF LKK GI+ GS P ++ G +TR+ I +IA+ KM D+ A
Sbjct: 60 YEDKSFTFIIKTPPASFLLKKAAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANS 119
Query: 122 IEGAMRMVEGSACSMGISVVD 142
+E AM+++EG+A SMGI VVD
Sbjct: 120 LEAAMKIIEGTAKSMGIEVVD 140