HHsearch alignment for GI: 254780148 and conserved domain: pfam00467
>pfam00467 KOW KOW motif. This family has been extended to coincide with ref. The KOW (Kyprides, Ouzounis, Woese) motif is found in a variety of ribosomal proteins and NusG.
Probab=96.62 E-value=0.0022 Score=40.32 Aligned_cols=30 Identities=47% Similarity=0.712 Sum_probs=25.8
Q ss_pred CCCEEEEECCCCCCCEEEEEEECCCCCEEE
Q ss_conf 897799951877897199999828898899
Q gi|254780148|r 125 VGERVCVSDGPFASFNGIVKNVDEEKSRVH 154 (177)
Q Consensus 125 ~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~ 154 (177)
T Consensus 1 ~G~~V~V~~G~~~G~~g~I~~i~~~~~~v~ 30 (32)
T pfam00467 1 KGDVVRVISGPFKGKKGKVVEVDDSKARVH 30 (32)
T ss_pred CCCEEEEECCCCCCCCCCEEEECCCCEEEE
T ss_conf 987899934675687554899607520685