HHsearch alignment of GI: 254780148 and MMDB domain: 2do3_A_

>2do3_A (A:) Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.06  E-value=0.016  Score=34.65  Aligned_cols=45  Identities=24%  Similarity=0.315  Sum_probs=37.5

Q ss_pred             CCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEE
Q ss_conf             23478977999518778971999998288988999998168704788
Q gi|254780148|r  121 VFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVEVVIFGRVTPVE  167 (177)
Q Consensus       121 ~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~v~i~Gr~~~v~  167 (177)
                      ..|++||.|+|++|-++|-.|.|.+++.  .++.++-+.-+++..|.
T Consensus        16 K~F~~GDhVkVi~G~~~getGlVV~v~~--d~v~i~SD~t~~Ei~V~   60 (69)
T 2do3_A           16 KYFKMGDHVKVIAGRFEGDTGLIVRVEE--NFVILFSDLTMHELKVL   60 (69)
T ss_dssp             SSCCTTCEEEESSSTTTTCEEEEEEECS--SCEEEEESSSCSEEEEC
T ss_pred             ECCCCCCEEEEECCEECCCCEEEEEEEC--CEEEEEECCCCCEEEEE
T ss_conf             2057998389906468696289999939--99999858999889996