HHsearch results for GI: 254780148 and protein with PDBid: 2do3_A

>2do3_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.5.5
Probab=96.04  E-value=0.012  Score=34.58  Aligned_cols=44  Identities=25%  Similarity=0.343  Sum_probs=36.5

Q ss_pred             CCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEE
Q ss_conf             2347897799951877897199999828898899999816870478
Q gi|254780148|r  121 VFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVEVVIFGRVTPV  166 (177)
Q Consensus       121 ~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~v~i~Gr~~~v  166 (177)
                      ..|++||.|+|++|-++|-.|.|.+++.  .++.++-+.-.++..|
T Consensus        16 K~F~~GDHVkVi~G~~~GetGlVV~v~~--~~v~~~sD~t~~Ei~V   59 (69)
T 2do3_A           16 KYFKMGDHVKVIAGRFEGDTGLIVRVEE--NFVILFSDLTMHELKV   59 (69)
T ss_dssp             SSCCTTCEEEESSSTTTTCEEEEEEECS--SCEEEEESSSCSEEEE
T ss_pred             EECCCCCEEEEECCEECCCCEEEEEEEC--CEEEEEECCCCCEEEE
T ss_conf             5134998389906568697579999969--9999985899878999