HHsearch results for GI: 254780148 and protein with PDBid: 2exu_A
>2exu_A Transcription initiation protein SPT4/SPT5; helixs surrounding beta sheet; 2.23A {Saccharomyces cerevisiae}
Probab=97.54 E-value=0.00011 Score=46.68 Aligned_cols=83 Identities=12% Similarity=0.109 Sum_probs=56.1
Q ss_pred CEEEEEECCCCHHHHHHHHHHHH---HHCCCHH--HCCEEEEECCCCEEEECCEEEEEECCEECEEEEEEEECCCCCHHH
Q ss_conf 61899952885389999999999---9779811--143266313101277202035664120330999999618652244
Q gi|254780148|r 4 RWYIVQVYSNCEKKAVESIGGRL---SRSGLDH--LVTEITIPSERVVSVRKGRKVNSERRFFPGYVLIKAVMTDKVYHT 78 (177)
Q Consensus 4 ~Wyvv~t~~~~E~~v~~~L~~~~---~~~~~~~--~~~~v~~P~~~~~~~~~g~~~~~~~plfpgYiFv~~~~~~~~~~~ 78 (177)
.=|+++|++|+|+.++.+|-++. .+.+-.+ .++.+|.| +=++|||||++....+....
T Consensus 103 sIw~Vrc~~GkErevv~~Im~K~~~l~~~~~~~~l~I~Sif~p-----------------~~lKGYIyVEA~~~~~V~~a 165 (200)
T 2exu_A 103 TIWGVRCRPGKEKELIRKLLKKKFNLDRAMGKKKLKILSIFQR-----------------DNYTGRIYIEAPKQSVIEKF 165 (200)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHHSCSSCCCCCEEECC-----------------TTSTTEEEEECSCHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC-----------------CCCCEEEEEEECCHHHHHHH
T ss_conf 5799975787179999999999999873146898766999956-----------------99747999987988999999
Q ss_pred HHCCCEEEEEECCCCCCCCCCHHHHHHHHH
Q ss_conf 420330366432788610025889999997
Q gi|254780148|r 79 IKDTPKVIGFLGTGENPSPVTDSEIEHIMN 108 (177)
Q Consensus 79 i~~t~gV~~~l~~~~~P~~i~~~ei~~l~~ 108 (177)
+...++|.+. .+..+|-+||.+|+.
T Consensus 166 i~Gl~~v~~~-----~~~lVpi~Em~~lL~ 190 (200)
T 2exu_A 166 CNGVPDIYIS-----QKLLIPVQELPLLLK 190 (200)
T ss_dssp HTTCTTEEEE-----EEEECCGGGHHHHHC
T ss_pred HHCCCCEECC-----CCCEECHHHHHHHCC
T ss_conf 8525001334-----651058899876466