HHsearch results for GI: 254780148 and protein with PDBid: 3h7h_B

>3h7h_B Transcription elongation factor SPT5; helices surrounding beta sheet, activator, metal-binding, nucleus, repressor, transcription regulation, zinc; 1.55A {Homo sapiens}
Probab=97.78  E-value=1e-05  Score=52.89  Aligned_cols=89  Identities=16%  Similarity=0.200  Sum_probs=59.3

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHCC---CHHHCCEEEEECCCCEEEECCEEEEEECCEECEEEEEEEECCCCCHH
Q ss_conf             988618999528853899999999999779---81114326631310127720203566412033099999961865224
Q gi|254780148|r    1 MTPRWYIVQVYSNCEKKAVESIGGRLSRSG---LDHLVTEITIPSERVVSVRKGRKVNSERRFFPGYVLIKAVMTDKVYH   77 (177)
Q Consensus         1 M~~~Wyvv~t~~~~E~~v~~~L~~~~~~~~---~~~~~~~v~~P~~~~~~~~~g~~~~~~~plfpgYiFv~~~~~~~~~~   77 (177)
                      |.|+=|+++|++|+|+.++..|.++.....   -+-.++.+|.|                 +-++|||||++....+...
T Consensus         4 ~DP~iw~Vk~~~G~E~~va~~i~~k~~~~~~~~~~l~I~Sv~~p-----------------~~lkGyIyVEA~~~~~V~~   66 (106)
T 3h7h_B            4 MDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAP-----------------EHVKGYIYVEAYKQTHVKQ   66 (106)
T ss_dssp             CCCEEEEEECCTTCHHHHHHHHHHHHHHHTTSSSCCCCCEEEEC-----------------TTCCSEEEEEESSHHHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECC-----------------CCCCEEEEEEECCHHHHHH
T ss_conf             89977999868980899999999999873246997650799824-----------------8883689998798899999


Q ss_pred             HHHCCCEEEEEECCCCCCCCCCHHHHHHHHHH
Q ss_conf             44203303664327886100258899999976
Q gi|254780148|r   78 TIKDTPKVIGFLGTGENPSPVTDSEIEHIMNQ  109 (177)
Q Consensus        78 ~i~~t~gV~~~l~~~~~P~~i~~~ei~~l~~~  109 (177)
                      .++..+++.+..   ..+.-+|-+||.+++..
T Consensus        67 ai~Gi~~v~~~~---~~~~lVpi~Em~~~L~~   95 (106)
T 3h7h_B           67 AIEGVGNLRLGY---WNQQMVPIKEMTDVLKV   95 (106)
T ss_dssp             HHTTCGGGGGGS---SCCEECCGGGTTGGGCC
T ss_pred             HHHCCHHHCCCC---CCCCEECHHHHHHHCCC
T ss_conf             985212212556---84617749997765513