HHsearch results for GI: 254780148 and protein with PDBid: 3h7h_B
>3h7h_B Transcription elongation factor SPT5; helices surrounding beta sheet, activator, metal-binding, nucleus, repressor, transcription regulation, zinc; 1.55A {Homo sapiens}
Probab=97.78 E-value=1e-05 Score=52.89 Aligned_cols=89 Identities=16% Similarity=0.200 Sum_probs=59.3
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHCC---CHHHCCEEEEECCCCEEEECCEEEEEECCEECEEEEEEEECCCCCHH
Q ss_conf 988618999528853899999999999779---81114326631310127720203566412033099999961865224
Q gi|254780148|r 1 MTPRWYIVQVYSNCEKKAVESIGGRLSRSG---LDHLVTEITIPSERVVSVRKGRKVNSERRFFPGYVLIKAVMTDKVYH 77 (177)
Q Consensus 1 M~~~Wyvv~t~~~~E~~v~~~L~~~~~~~~---~~~~~~~v~~P~~~~~~~~~g~~~~~~~plfpgYiFv~~~~~~~~~~ 77 (177)
|.|+=|+++|++|+|+.++..|.++..... -+-.++.+|.| +-++|||||++....+...
T Consensus 4 ~DP~iw~Vk~~~G~E~~va~~i~~k~~~~~~~~~~l~I~Sv~~p-----------------~~lkGyIyVEA~~~~~V~~ 66 (106)
T 3h7h_B 4 MDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAP-----------------EHVKGYIYVEAYKQTHVKQ 66 (106)
T ss_dssp CCCEEEEEECCTTCHHHHHHHHHHHHHHHTTSSSCCCCCEEEEC-----------------TTCCSEEEEEESSHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECC-----------------CCCCEEEEEEECCHHHHHH
T ss_conf 89977999868980899999999999873246997650799824-----------------8883689998798899999
Q ss_pred HHHCCCEEEEEECCCCCCCCCCHHHHHHHHHH
Q ss_conf 44203303664327886100258899999976
Q gi|254780148|r 78 TIKDTPKVIGFLGTGENPSPVTDSEIEHIMNQ 109 (177)
Q Consensus 78 ~i~~t~gV~~~l~~~~~P~~i~~~ei~~l~~~ 109 (177)
.++..+++.+.. ..+.-+|-+||.+++..
T Consensus 67 ai~Gi~~v~~~~---~~~~lVpi~Em~~~L~~ 95 (106)
T 3h7h_B 67 AIEGVGNLRLGY---WNQQMVPIKEMTDVLKV 95 (106)
T ss_dssp HHTTCGGGGGGS---SCCEECCGGGTTGGGCC
T ss_pred HHHCCHHHCCCC---CCCCEECHHHHHHHCCC
T ss_conf 985212212556---84617749997765513