Query gi|254780148|ref|YP_003064561.1| transcription antitermination protein NusG [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 177
No_of_seqs 123 out of 1849
Neff 8.0
Searched_HMMs 13730
Date Sun May 22 15:24:19 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780148.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nz8a_ d.58.42.1 (A:) N-utili 100.0 1.5E-30 1.1E-34 200.2 10.1 110 2-111 1-116 (119)
2 d1m1ha2 d.58.42.1 (A:5-50,A:13 99.9 5.7E-28 4.2E-32 184.7 9.1 96 1-111 5-100 (101)
3 d1nppa2 b.34.5.4 (A:191-248) N 99.6 1.4E-15 1E-19 110.5 7.1 57 120-176 2-58 (58)
4 d1nz9a_ b.34.5.4 (A:) N-utiliz 99.6 3.4E-15 2.5E-19 108.3 7.7 56 120-175 2-57 (58)
5 d1vqot1 b.34.5.1 (T:1-119) Rib 96.4 0.0023 1.7E-07 37.4 5.2 37 120-156 39-75 (119)
6 d2do3a1 b.34.5.5 (A:462-523) T 95.9 0.0089 6.5E-07 33.9 5.9 44 121-166 9-52 (62)
7 d2zjrr1 b.34.5.1 (R:4-113) Rib 95.6 0.0084 6.1E-07 34.1 4.9 40 120-159 10-50 (110)
8 d2gycs1 b.34.5.1 (S:3-101) Rib 92.7 0.074 5.4E-06 28.4 4.5 33 123-156 2-34 (99)
9 d2j01y1 b.34.5.1 (Y:2-102) Rib 92.3 0.0056 4E-07 35.1 -1.6 39 121-159 4-43 (101)
10 d2joya1 b.34.5.7 (A:1-96) Ribo 78.4 1.4 9.9E-05 20.8 4.3 34 122-156 3-36 (96)
11 d1v29b_ b.34.4.4 (B:) Cobalt-c 74.7 1.9 0.00014 20.0 4.1 29 119-147 138-176 (229)
12 d1ib8a1 b.38.2.1 (A:91-164) Hy 73.0 2.6 0.00019 19.1 5.8 50 125-176 13-66 (74)
13 d1ugpb_ b.34.4.4 (B:) Cobalt-c 70.6 2.2 0.00016 19.6 3.7 28 119-146 135-172 (226)
14 d1vhka1 b.122.1.2 (A:2-73) Hyp 55.1 5.8 0.00042 17.1 4.3 36 120-157 31-66 (72)
15 d2pu9b1 b.34.4.3 (B:1-73) Ferr 52.8 6.3 0.00046 16.8 3.5 51 124-175 2-72 (73)
16 d1nxza1 b.122.1.2 (A:2-73) Hyp 51.4 6.4 0.00047 16.8 3.3 55 94-163 15-69 (72)
17 d1vbka2 d.308.1.1 (A:1-175) Hy 47.5 7.6 0.00055 16.4 3.1 57 11-89 19-75 (175)
18 d2vv5a1 b.38.1.3 (A:113-179) M 46.4 8 0.00058 16.2 4.5 44 120-173 15-58 (67)
19 d2g50a3 c.49.1.1 (A:396-530) P 35.5 12 0.00086 15.2 4.8 82 52-141 43-124 (135)
20 d2d9ta1 b.34.9.1 (A:8-67) Tudo 32.9 13 0.00095 14.9 5.7 53 122-176 2-55 (60)
21 d2f5ka1 b.34.13.3 (A:6-88) Mor 32.9 13 0.00095 14.9 5.1 42 119-161 2-43 (83)
22 d1wjsa_ b.34.9.3 (A:) Lethal(3 30.4 14 0.0011 14.7 3.3 15 59-73 38-52 (127)
23 d1vqoq1 b.34.5.1 (Q:1-95) Ribo 29.1 15 0.0011 14.6 7.5 52 122-175 32-93 (95)
24 d1a8pa1 b.43.4.2 (A:2-100) Fer 28.3 16 0.0011 14.5 2.4 18 122-139 81-98 (99)
25 d1mhna_ b.34.9.1 (A:) Survival 27.0 17 0.0012 14.3 5.4 51 122-176 3-56 (59)
26 d1h3ga1 b.1.18.2 (A:3-95) Cycl 26.7 15 0.0011 14.5 2.0 21 54-74 45-65 (93)
27 d2qdyb1 b.34.4.4 (B:1-211) Iro 22.9 20 0.0014 13.9 3.1 67 75-145 71-155 (211)
28 d1oz2a3 b.34.9.3 (A:422-527) L 22.9 20 0.0014 13.9 4.7 38 120-161 25-64 (106)
29 d2zjrm1 b.34.5.6 (M:2-109) Rib 22.6 20 0.0015 13.8 3.6 41 105-147 10-57 (108)
No 1
>d1nz8a_ d.58.42.1 (A:) N-utilization substance G protein NusG, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=99.97 E-value=1.5e-30 Score=200.17 Aligned_cols=110 Identities=31% Similarity=0.674 Sum_probs=101.7
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCEEEE-CCEEEEEECCEECEEEEEEEECCC-----CC
Q ss_conf 886189995288538999999999997798111432663131012772-020356641203309999996186-----52
Q gi|254780148|r 2 TPRWYIVQVYSNCEKKAVESIGGRLSRSGLDHLVTEITIPSERVVSVR-KGRKVNSERRFFPGYVLIKAVMTD-----KV 75 (177)
Q Consensus 2 ~~~Wyvv~t~~~~E~~v~~~L~~~~~~~~~~~~~~~v~~P~~~~~~~~-~g~~~~~~~plfpgYiFv~~~~~~-----~~ 75 (177)
+++||||+|+||+|++|+++|+++++..+++++++++++|++++...+ +|+++.+.+|+|||||||++++++ ++
T Consensus 1 ~mkWYvl~t~sg~E~~v~~~L~~~i~~~~l~~~~~~v~vP~e~~~~~k~~gkk~~~~~~lFPGYvfV~~~~~d~~~~~~~ 80 (119)
T d1nz8a_ 1 SIEWYAVHTLVGQEEKAKANLEKRIKAFGLQDKIFQVLIPTEEVVELREGGKKEVVRKKLFPGYLFIQMDLGDEEEPNEA 80 (119)
T ss_dssp CCEEEEEECCTTTHHHHHHHHHHHHHHHTCTTTCCEEECSEEEEEEECSSSCEEEEEEESSTTEEEEEECCCSSSSCCHH
T ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCHHH
T ss_conf 96599999578938999999999998846432244232374568999925632773024588389999864765443026
Q ss_pred HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 244420330366432788610025889999997653
Q gi|254780148|r 76 YHTIKDTPKVIGFLGTGENPSPVTDSEIEHIMNQVE 111 (177)
Q Consensus 76 ~~~i~~t~gV~~~l~~~~~P~~i~~~ei~~l~~~~~ 111 (177)
|+.|++|+||++||+++++|.||+++||++|+...+
T Consensus 81 ~~~Ir~t~gV~~fvg~~~~P~pv~~~Ei~~il~~~g 116 (119)
T d1nz8a_ 81 WEVVRGTPGITGFVGAGMRPVPLSPDEVRHILEVSG 116 (119)
T ss_dssp HHHHHHSTTCCCCCCSSSSSCBCCHHHHHHHHHHHT
T ss_pred HHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 789853898069868998606489999999999857
No 2
>d1m1ha2 d.58.42.1 (A:5-50,A:132-186) N-utilization substance G protein NusG, N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.95 E-value=5.7e-28 Score=184.73 Aligned_cols=96 Identities=38% Similarity=0.705 Sum_probs=91.6
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCEEEECCEEEEEECCEECEEEEEEEECCCCCHHHHH
Q ss_conf 98861899952885389999999999977981114326631310127720203566412033099999961865224442
Q gi|254780148|r 1 MTPRWYIVQVYSNCEKKAVESIGGRLSRSGLDHLVTEITIPSERVVSVRKGRKVNSERRFFPGYVLIKAVMTDKVYHTIK 80 (177)
Q Consensus 1 M~~~Wyvv~t~~~~E~~v~~~L~~~~~~~~~~~~~~~v~~P~~~~~~~~~g~~~~~~~plfpgYiFv~~~~~~~~~~~i~ 80 (177)
|+++|||+||+||+|++|+++|++++...++++.+.++.+|+ +++|||||||++++++++|+.|+
T Consensus 5 ~~kkWYvv~t~Sg~E~kV~~~l~~~~~~~~l~~~i~~v~VP~---------------~klfPGYvfV~~~~~~~~~~~Ir 69 (101)
T d1m1ha2 5 LEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPA---------------NKIFPGYILIKAHMNDKLLMAIE 69 (101)
T ss_dssp CCCEEEEEEECTTCHHHHHHHHHHHHHHTTCGGGEEEEECSS---------------CSSSTTEEEEEECCCHHHHHHHH
T ss_pred CCCCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHCCC---------------HHCCCCEEEEEEEECCHHHHHHH
T ss_conf 358679999378956999999999998718056668786522---------------10378779999974746789985
Q ss_pred CCCEEEEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 0330366432788610025889999997653
Q gi|254780148|r 81 DTPKVIGFLGTGENPSPVTDSEIEHIMNQVE 111 (177)
Q Consensus 81 ~t~gV~~~l~~~~~P~~i~~~ei~~l~~~~~ 111 (177)
+|+||++|||++++|.||+++|+++|++.++
T Consensus 70 ~t~gV~~fvg~~~~P~pl~~~Ev~~il~~v~ 100 (101)
T d1m1ha2 70 KTPHVFRPVMVGGKPVPLKEEEVQNILNQIK 100 (101)
T ss_dssp TSTTEEEECEETTEECEECHHHHHHHHHHTT
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 4998788268898417699999999999863
No 3
>d1nppa2 b.34.5.4 (A:191-248) N-utilization substance G protein NusG, C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.58 E-value=1.4e-15 Score=110.54 Aligned_cols=57 Identities=53% Similarity=0.887 Sum_probs=54.4
Q ss_pred CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEECHHHHEEC
Q ss_conf 123478977999518778971999998288988999998168704788567871233
Q gi|254780148|r 120 SVFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVEVVIFGRVTPVELAYNQVEKI 176 (177)
Q Consensus 120 ~~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~v~i~Gr~~~v~l~~~~ieki 176 (177)
...|++||.|+|++|||+|++|.|.++|.+++|++|++++|||.|+|+++++||+||
T Consensus 2 kvdf~~Gd~V~I~~GpF~g~~g~V~~i~~~~~rv~V~v~~fGr~t~vel~~~~veki 58 (58)
T d1nppa2 2 KVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI 58 (58)
T ss_dssp SCSCCTTCEEEECSSTTTTCEEEEEEEEGGGTEEEEEEEETTEEEEEEEEGGGEEEC
T ss_pred CCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEECHHHEEEC
T ss_conf 655259999999126899989999998288999999996009983586688998949
No 4
>d1nz9a_ b.34.5.4 (A:) N-utilization substance G protein NusG, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=99.56 E-value=3.4e-15 Score=108.26 Aligned_cols=56 Identities=50% Similarity=0.841 Sum_probs=53.8
Q ss_pred CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEECHHHHEE
Q ss_conf 12347897799951877897199999828898899999816870478856787123
Q gi|254780148|r 120 SVFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVEVVIFGRVTPVELAYNQVEK 175 (177)
Q Consensus 120 ~~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~v~i~Gr~~~v~l~~~~iek 175 (177)
...|++||.|+|++|||+|++|.|.++|.+++|++|+++||||.|+++++++||+|
T Consensus 2 ~v~F~~Gd~V~I~~GpF~g~~g~V~~i~~~k~rv~V~v~ifGr~t~vel~~~~ieK 57 (58)
T d1nz9a_ 2 QVAFREGDQVRVVSGPFADFTGTVTEINPERGKVKVMVTIFGRETPVELDFSQVVK 57 (58)
T ss_dssp CCSCCTTCEEEECSGGGTTCEEEEEEEETTTTEEEEEEESSSSEEEEEECGGGEEE
T ss_pred CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEECHHHEEC
T ss_conf 02206999999900589998899999928899999999953998458569999870
No 5
>d1vqot1 b.34.5.1 (T:1-119) Ribosomal proteins L24 (L24p) {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=96.44 E-value=0.0023 Score=37.42 Aligned_cols=37 Identities=43% Similarity=0.548 Sum_probs=33.4
Q ss_pred CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEE
Q ss_conf 1234789779995187789719999982889889999
Q gi|254780148|r 120 SVFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVE 156 (177)
Q Consensus 120 ~~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~ 156 (177)
...+..||.|.|+.|.++|-+|.|.+++..++++.|.
T Consensus 39 ~~~IkkGD~V~Vi~Gk~KGk~GkV~~V~~k~~~V~Ve 75 (119)
T d1vqot1 39 NVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVE 75 (119)
T ss_dssp EEECCTTCEEEECSSTTTTCEEEEEEEETTTTEEEET
T ss_pred CCCEECCCEEEEEECCCCCCCCEEEEEECCCCEEEEE
T ss_conf 3514279999992547899851499998779999996
No 6
>d2do3a1 b.34.5.5 (A:462-523) Transcription elongation factor SPT5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.88 E-value=0.0089 Score=33.90 Aligned_cols=44 Identities=25% Similarity=0.343 Sum_probs=36.2
Q ss_pred CCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEE
Q ss_conf 2347897799951877897199999828898899999816870478
Q gi|254780148|r 121 VFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVEVVIFGRVTPV 166 (177)
Q Consensus 121 ~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~v~i~Gr~~~v 166 (177)
..|++||.|+|++|-++|-.|.|.+++. .++.++-+.-+.+..|
T Consensus 9 K~F~~GDhVkVi~G~~~g~tGlVV~v~~--~~v~~~SD~t~~Ei~V 52 (62)
T d2do3a1 9 KYFKMGDHVKVIAGRFEGDTGLIVRVEE--NFVILFSDLTMHELKV 52 (62)
T ss_dssp SSCCTTCEEEESSSTTTTCEEEEEEECS--SCEEEEESSSCSEEEE
T ss_pred ECCCCCCEEEEECCEECCCCEEEEEEEC--CEEEEEECCCCCEEEE
T ss_conf 2157998589916478696289999949--9999985899989999
No 7
>d2zjrr1 b.34.5.1 (R:4-113) Ribosomal proteins L24 (L24p) {Deinococcus radiodurans [TaxId: 1299]}
Probab=95.61 E-value=0.0084 Score=34.06 Aligned_cols=40 Identities=28% Similarity=0.336 Sum_probs=34.1
Q ss_pred CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEE-EEE
Q ss_conf 1234789779995187789719999982889889999-981
Q gi|254780148|r 120 SVFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVE-VVI 159 (177)
Q Consensus 120 ~~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~-v~i 159 (177)
...+..||.|.|++|..+|-.|.|.+++.+++++.|. +++
T Consensus 10 K~kikkGD~V~VisGkdKGk~G~Vl~V~~~~~~ViVeGvN~ 50 (110)
T d2zjrr1 10 KLHFKKGDTVIVLSGKHKGQTGKVLLALPRDQKVVVEGVNV 50 (110)
T ss_dssp CCSSCTTSEEECCSSSSTTCEEEEEEEETTTTEEEESSSCB
T ss_pred EEEEECCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCEE
T ss_conf 22432799999904588996147999988899999958599
No 8
>d2gycs1 b.34.5.1 (S:3-101) Ribosomal proteins L24 (L24p) {Escherichia coli [TaxId: 562]}
Probab=92.71 E-value=0.074 Score=28.42 Aligned_cols=33 Identities=33% Similarity=0.311 Sum_probs=28.5
Q ss_pred CCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEE
Q ss_conf 4789779995187789719999982889889999
Q gi|254780148|r 123 FEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVE 156 (177)
Q Consensus 123 ~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~ 156 (177)
+..||.|.|++|.-+|-.|.|.++.. ++++.|.
T Consensus 2 ikkGD~V~VisGkdKGK~G~V~~V~~-~~~viVe 34 (99)
T d2gycs1 2 IRRDDEVIVLTGKDKGKRGKVKNVLS-SGKVIVE 34 (99)
T ss_dssp CCTTSEEECSSSTTTTCEEEEEEECT-TSEEEET
T ss_pred CCCCCEEEEEECCCCCCCEEEEEEEC-CCEEEEE
T ss_conf 64799999906888997368999979-9969996
No 9
>d2j01y1 b.34.5.1 (Y:2-102) Ribosomal proteins L24 (L24p) {Thermus thermophilus [TaxId: 274]}
Probab=92.34 E-value=0.0056 Score=35.14 Aligned_cols=39 Identities=36% Similarity=0.420 Sum_probs=33.1
Q ss_pred CCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEE-EEE
Q ss_conf 234789779995187789719999982889889999-981
Q gi|254780148|r 121 VFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVE-VVI 159 (177)
Q Consensus 121 ~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~-v~i 159 (177)
..+..||.|.|++|..+|-+|.|.+++..++++.|. +++
T Consensus 4 ~kIkkGD~V~VisGkdKGk~G~Vl~V~~~~~~ViVeGvN~ 43 (101)
T d2j01y1 4 MHVKKGDTVLVASGKYKGRVGKVKEVLPKKYAVIVEGVNI 43 (101)
T ss_dssp CCSCCSSCEECCSSTTSSCCBSCCCCCCTTCBCCTTSCCC
T ss_pred CEEECCCEEEEEECCCCCCEEEEEEEECCCCEEEEECCEE
T ss_conf 2877899999905788997078999999899999974448
No 10
>d2joya1 b.34.5.7 (A:1-96) Ribosomal protein L14e {Sulfolobus solfataricus [TaxId: 2287]}
Probab=78.40 E-value=1.4 Score=20.83 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=27.8
Q ss_pred CCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEE
Q ss_conf 34789779995187789719999982889889999
Q gi|254780148|r 122 FFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVE 156 (177)
Q Consensus 122 ~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~ 156 (177)
..++|--+.+..||++|-.+.|.++- +.+|+.|.
T Consensus 3 ~VevGrV~ii~~G~~~GK~~vIvdii-d~~rvLVd 36 (96)
T d2joya1 3 AIEVGRICVKVKGREAGSKCVIVDII-DDNFVLVT 36 (96)
T ss_dssp SSSTTEEEECSSSSTTCCEEEEEEEC-SSSCEEEE
T ss_pred CEECCEEEEEEECCCCCCEEEEEEEE-CCCEEEEE
T ss_conf 46545899996068789789999996-69869995
No 11
>d1v29b_ b.34.4.4 (B:) Cobalt-containing nitrile hydratase {Bacillus smithii [TaxId: 1479]}
Probab=74.68 E-value=1.9 Score=20.01 Aligned_cols=29 Identities=31% Similarity=0.332 Sum_probs=22.8
Q ss_pred CCCCCCCCCEEEEECC----------CCCCCEEEEEEEC
Q ss_conf 0123478977999518----------7789719999982
Q gi|254780148|r 119 SSVFFEVGERVCVSDG----------PFASFNGIVKNVD 147 (177)
Q Consensus 119 ~~~~~~~G~~V~I~~G----------pf~g~~g~v~~i~ 147 (177)
....|++||+|+|.+- ...|..|+|..+.
T Consensus 138 ~~p~F~vGd~Vrv~~~~~~gHtRlP~Y~rg~~G~i~~~~ 176 (229)
T d1v29b_ 138 SFPRFEVGERIKTRNIHPTGHTRFPRYVRDKYGVIEEVY 176 (229)
T ss_dssp CCCSCCTTCEEEECCCCCSSCCSCCGGGTTCEEEEEEEE
T ss_pred CCCCCCCCCEEEEEECCCCCCCCCCHHHCCCEEEEEEEE
T ss_conf 899679999899805788872126365668755999873
No 12
>d1ib8a1 b.38.2.1 (A:91-164) Hypothetical protein SP14.3 (SP0552) {Streptococcus pneumoniae [TaxId: 1313]}
Probab=72.99 E-value=2.6 Score=19.13 Aligned_cols=50 Identities=24% Similarity=0.392 Sum_probs=36.3
Q ss_pred CCCEEEEE-CCCCCC---CEEEEEEECCCCCEEEEEEEECCCEEEEEECHHHHEEC
Q ss_conf 89779995-187789---71999998288988999998168704788567871233
Q gi|254780148|r 125 VGERVCVS-DGPFAS---FNGIVKNVDEEKSRVHVEVVIFGRVTPVELAYNQVEKI 176 (177)
Q Consensus 125 ~G~~V~I~-~Gpf~g---~~g~v~~i~~~~~r~~V~v~i~Gr~~~v~l~~~~ieki 176 (177)
.|..|.|. ..|+.| |.|.+.+++.+ .+++.++-=+....+++++++|++.
T Consensus 13 ~G~~v~v~l~~p~~g~k~f~G~L~~~~~~--~i~l~~~~~~~~~~~~i~~~~I~kA 66 (74)
T d1ib8a1 13 VGKYIHVGLYQAIDKQKVFEGTLLAFEED--ELTMEYMDKTRKKTVQIPYSLVSKA 66 (74)
T ss_dssp CSEEEEEECSSCSSSCSEEEEEEEEEETT--EEEEEEECSSCEEEEEECSSCCSSC
T ss_pred CCCEEEEEEECCCCCCEEEEEEEEEECCC--EEEEEEECCCCCEEEEECHHHHEEE
T ss_conf 79989999964339951799999746287--5999991576428999828991028
No 13
>d1ugpb_ b.34.4.4 (B:) Cobalt-containing nitrile hydratase {Pseudonocardia thermophila [TaxId: 1848]}
Probab=70.63 E-value=2.2 Score=19.60 Aligned_cols=28 Identities=21% Similarity=0.159 Sum_probs=22.4
Q ss_pred CCCCCCCCCEEEEECC----------CCCCCEEEEEEE
Q ss_conf 0123478977999518----------778971999998
Q gi|254780148|r 119 SSVFFEVGERVCVSDG----------PFASFNGIVKNV 146 (177)
Q Consensus 119 ~~~~~~~G~~V~I~~G----------pf~g~~g~v~~i 146 (177)
..+.|++||+|++.+- ...|..|+|..+
T Consensus 135 ~~p~F~vGd~Vrv~~~~~~gHtR~P~Y~rg~~G~I~~~ 172 (226)
T d1ugpb_ 135 RPPKFKEGDVVRFSTASPKGHARRARYVRGKTGTVVKH 172 (226)
T ss_dssp SCCSCCTTCEEEECCCCCSSCCCCCGGGTTCEEEEEEE
T ss_pred CCCCCCCCCEEEECCCCCCCCEECCHHHCCCEEEEEEE
T ss_conf 89835899988971589998122766666875589997
No 14
>d1vhka1 b.122.1.2 (A:2-73) Hypothetical protein YqeU {Bacillus subtilis [TaxId: 1423]}
Probab=55.10 E-value=5.8 Score=17.06 Aligned_cols=36 Identities=11% Similarity=0.118 Sum_probs=27.2
Q ss_pred CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf 12347897799951877897199999828898899999
Q gi|254780148|r 120 SVFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVEV 157 (177)
Q Consensus 120 ~~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~v 157 (177)
-.+.++||.+.+.+|-=.-+.|.|..++. ..+.+.+
T Consensus 31 VLR~k~Gd~i~l~dg~g~~~~~~I~~i~k--~~v~~~i 66 (72)
T d1vhka1 31 VMRMNEGDQIICCSQDGFEAKCELQSVSK--DKVSCLV 66 (72)
T ss_dssp TTCCCTTCEEEEECTTSCEEEEEEEEECS--SEEEEEE
T ss_pred EECCCCCCEEEEEECCCCEEEEEEEEEEC--CEEEEEE
T ss_conf 64567999999998979999999999979--9899999
No 15
>d2pu9b1 b.34.4.3 (B:1-73) Ferredoxin thioredoxin reductase (FTR), alpha (variable) chain {Synechocystis sp. [TaxId: 1143]}
Probab=52.79 E-value=6.3 Score=16.84 Aligned_cols=51 Identities=25% Similarity=0.283 Sum_probs=30.2
Q ss_pred CCCCEEEEEC-----------CC---CCCCEEEEEEECC-CCCEE-----EEEEEECCCEEEEEECHHHHEE
Q ss_conf 7897799951-----------87---7897199999828-89889-----9999816870478856787123
Q gi|254780148|r 124 EVGERVCVSD-----------GP---FASFNGIVKNVDE-EKSRV-----HVEVVIFGRVTPVELAYNQVEK 175 (177)
Q Consensus 124 ~~G~~V~I~~-----------Gp---f~g~~g~v~~i~~-~~~r~-----~V~v~i~Gr~~~v~l~~~~iek 175 (177)
++||+|+|.+ |+ +.|++|+|..+-. =++|- -+.+. |+..-.+-+-.+++|-
T Consensus 2 kvGdrVrV~~sv~VyhhP~hr~~~~Dl~G~eGeV~~~v~~wkGr~ISanlP~~V~-F~~kF~aHlredElE~ 72 (73)
T d2pu9b1 2 NVGDRVRVTSSVVVYHHPEHKKTAFDLQGMEGEVAAVLTEWQGRPISANLPVLVK-FEQRFKAHFRPDEVTL 72 (73)
T ss_dssp CTTCEEEECSCCEESCCTTSTTSCEECTTCEEEEEEECSEETTEECCCSSCEEEE-CGGGCEEEECGGGEEE
T ss_pred CCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEECCCCCEEEE-ECCCEEEEECCCCEEE
T ss_conf 8899999800189984876579873567878788678740378595699769999-7531037765001676
No 16
>d1nxza1 b.122.1.2 (A:2-73) Hypothetical protein HI0303 {Haemophilus influenzae [TaxId: 727]}
Probab=51.43 E-value=6.4 Score=16.80 Aligned_cols=55 Identities=18% Similarity=0.323 Sum_probs=35.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCE
Q ss_conf 6100258899999976532221000012347897799951877897199999828898899999816870
Q gi|254780148|r 94 NPSPVTDSEIEHIMNQVEAAVQRPVSSVFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVEVVIFGRV 163 (177)
Q Consensus 94 ~P~~i~~~ei~~l~~~~~~~~~~~~~~~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~v~i~Gr~ 163 (177)
.-..+++++...+. .-.+.++||.|.+.+|-=.-+.|.|.+++. ..+ .+.+..+.
T Consensus 15 ~~i~L~~~~~hHl~-----------~VLR~k~Gd~v~l~dg~g~~~~~~I~~i~k--~~~--~~~i~~~~ 69 (72)
T d1nxza1 15 TQCYLSEDAANHVA-----------RVLRMTEGEQLELFDGSNHIYPAKIIESNK--KSV--KVEILGRE 69 (72)
T ss_dssp SEEECCHHHHHHHH-----------TTSCCCTTCEEEEECSSSEEEEEEEEEEET--TEE--EEEECCCE
T ss_pred CEEECCHHHHHHHH-----------HEECCCCCCEEEEEECCCCEEEEEEEEEEC--CEE--EEEEEEEE
T ss_conf 99985989977898-----------623778999999995999999999999749--989--99999985
No 17
>d1vbka2 d.308.1.1 (A:1-175) Hypothetical protein PH1313, N-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=47.49 E-value=7.6 Score=16.36 Aligned_cols=57 Identities=16% Similarity=0.105 Sum_probs=34.7
Q ss_pred CCCCHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCEEEECCEEEEEECCEECEEEEEEEECCCCCHHHHHCCCEEEEEE
Q ss_conf 2885389999999999977981114326631310127720203566412033099999961865224442033036643
Q gi|254780148|r 11 YSNCEKKAVESIGGRLSRSGLDHLVTEITIPSERVVSVRKGRKVNSERRFFPGYVLIKAVMTDKVYHTIKDTPKVIGFL 89 (177)
Q Consensus 11 ~~~~E~~v~~~L~~~~~~~~~~~~~~~v~~P~~~~~~~~~g~~~~~~~plfpgYiFv~~~~~~~~~~~i~~t~gV~~~l 89 (177)
+...|+...+||+..+...+++.. ++ . --.|++++..+..++.-..+..++|+.++-
T Consensus 19 R~~Fe~~L~~Ni~~~L~~~~~~~~--~v--------~------------~~~~ri~v~~~~~~~~~~~L~~vfGI~~~s 75 (175)
T d1vbka2 19 RSWFEKILMNNIREALVTEEVPYK--EI--------F------------SRHGRIIVKTNSPKEAANVLVRVFGIVSIS 75 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCS--EE--------E------------EETTEEEEECSCHHHHHHHHTTSTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCE--EE--------E------------EECCEEEEECCCHHHHHHHHHHCCCCCEEE
T ss_conf 899999999999999985699834--99--------9------------964899998699599999997689977198
No 18
>d2vv5a1 b.38.1.3 (A:113-179) Mechanosensitive channel protein MscS (YggB), middle domain {Escherichia coli [TaxId: 562]}
Probab=46.40 E-value=8 Score=16.23 Aligned_cols=44 Identities=18% Similarity=0.201 Sum_probs=28.7
Q ss_pred CCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEECHHHH
Q ss_conf 123478977999518778971999998288988999998168704788567871
Q gi|254780148|r 120 SVFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVEVVIFGRVTPVELAYNQV 173 (177)
Q Consensus 120 ~~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~v~i~Gr~~~v~l~~~~i 173 (177)
..+|.+||.|+| .|..|.|.++.. +.+.+.+.-|+. +.++-.++
T Consensus 15 ~~pf~vGD~I~i-----~~~~G~V~~I~l---~~T~l~~~dg~~--i~iPN~~~ 58 (67)
T d2vv5a1 15 FRPFRAGEYVDL-----GGVAGTVLSVQI---FSTTMRTADGKI--IVIPNGKI 58 (67)
T ss_dssp TCSSCTTCEEES-----SSCEEEEEEECS---SEEEEECTTSCE--EEEEHHHH
T ss_pred ECCCCCCCEEEE-----CCEEEEEEEEEC---EEEEEECCCCCE--EEEECHHH
T ss_conf 078328999999-----998999999954---399999149989--99988897
No 19
>d2g50a3 c.49.1.1 (A:396-530) Pyruvate kinase, C-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=35.52 E-value=12 Score=15.20 Aligned_cols=82 Identities=13% Similarity=0.091 Sum_probs=47.2
Q ss_pred EEEEEECCEECEEEEEEEECCCCCHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
Q ss_conf 03566412033099999961865224442033036643278861002588999999765322210000123478977999
Q gi|254780148|r 52 RKVNSERRFFPGYVLIKAVMTDKVYHTIKDTPKVIGFLGTGENPSPVTDSEIEHIMNQVEAAVQRPVSSVFFEVGERVCV 131 (177)
Q Consensus 52 ~~~~~~~plfpgYiFv~~~~~~~~~~~i~~t~gV~~~l~~~~~P~~i~~~ei~~l~~~~~~~~~~~~~~~~~~~G~~V~I 131 (177)
+.....+|--|=|.| ..++.....+.-..||.-++.... +..-..+.++.+........ .....++.||.|.+
T Consensus 43 r~vSk~RP~~PI~a~---T~~~~~~r~L~L~~GV~p~~~~~~-~~~~~~~~~~~~~~~a~~~~---~~~g~~~~GD~VVv 115 (135)
T d2g50a3 43 HQVARYRPRAPIIAV---TRNHQTARQAHLYRGIFPVVCKDP-VQEAWAEDVDLRVNLAMNVG---KARGFFKKGDVVIV 115 (135)
T ss_dssp HHHHHTCCSSCEEEE---ESCHHHHHHGGGSTTEEEEECCSC-CCSSHHHHHHHHHHHHHHHH---HHHTSCCTTCEEEE
T ss_pred HHHHHCCCCCCEEEE---ECCHHHHHHHCCCCCEEEEECCCC-CCCCCCCCHHHHHHHHHHHH---HHCCCCCCCCEEEE
T ss_conf 999822689986675---258899755303377445431553-21222158999999999999---98499899799999
Q ss_pred ECCCCCCCEE
Q ss_conf 5187789719
Q gi|254780148|r 132 SDGPFASFNG 141 (177)
Q Consensus 132 ~~Gpf~g~~g 141 (177)
+.|-..| .|
T Consensus 116 v~G~~~g-~G 124 (135)
T d2g50a3 116 LTGWRPG-SG 124 (135)
T ss_dssp EECSSTT-CS
T ss_pred EECCCCC-CC
T ss_conf 8178899-97
No 20
>d2d9ta1 b.34.9.1 (A:8-67) Tudor domain-containing protein 3, TDRD3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.90 E-value=13 Score=14.95 Aligned_cols=53 Identities=9% Similarity=0.171 Sum_probs=35.9
Q ss_pred CCCCCCEEEEE-CCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEECHHHHEEC
Q ss_conf 34789779995-18778971999998288988999998168704788567871233
Q gi|254780148|r 122 FFEVGERVCVS-DGPFASFNGIVKNVDEEKSRVHVEVVIFGRVTPVELAYNQVEKI 176 (177)
Q Consensus 122 ~~~~G~~V~I~-~Gpf~g~~g~v~~i~~~~~r~~V~v~i~Gr~~~v~l~~~~ieki 176 (177)
-+++|+.+... +.-=.=+.|.|.+++.+++.+.|.+.=+|..- .++.++|.+|
T Consensus 2 ~wkvG~~c~A~~~~D~~wYRA~I~~i~~~~~~~~V~fvDYGn~e--~v~~~~lr~l 55 (60)
T d2d9ta1 2 VWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFTDYGNYE--EVLLSNIKPV 55 (60)
T ss_dssp CCCTTCEEEEECTTTCCEEEEEEEEECSSSSEEEEEETTTTEEE--EEEGGGEEEC
T ss_pred CCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEEEEEECCCCEE--EECHHHCCCC
T ss_conf 46769999999987897999999998278999999998799989--9838991927
No 21
>d2f5ka1 b.34.13.3 (A:6-88) Mortality factor 4-like protein 1, MRG15 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.87 E-value=13 Score=14.94 Aligned_cols=42 Identities=24% Similarity=0.328 Sum_probs=29.8
Q ss_pred CCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECC
Q ss_conf 0123478977999518778971999998288988999998168
Q gi|254780148|r 119 SSVFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHVEVVIFG 161 (177)
Q Consensus 119 ~~~~~~~G~~V~I~~Gpf~g~~g~v~~i~~~~~r~~V~v~i~G 161 (177)
+...|++|++|....||+ =++|.|.++....+...-+|..-|
T Consensus 2 p~~~f~~ge~Vlc~~~~~-lYeAkil~~~~~~~~~~Y~VHy~G 43 (83)
T d2f5ka1 2 PKPKFQEGERVLCFHGPL-LYEAKCVKVAIKDKQVKYFIHYSG 43 (83)
T ss_dssp CSCSCCTTCEEEEESSSS-EEEEEEEEEEEETTEEEEEEEETT
T ss_pred CCCCCCCCCEEEEEECCE-EEEEEEEEEEECCCCEEEEEEECC
T ss_conf 978557899899997890-587489999975894689998666
No 22
>d1wjsa_ b.34.9.3 (A:) Lethal(3)malignant brain tumor-like 3 protein, L3MBTL3 (KIAA1798) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.40 E-value=14 Score=14.69 Aligned_cols=15 Identities=0% Similarity=-0.294 Sum_probs=9.2
Q ss_pred CEECEEEEEEEECCC
Q ss_conf 203309999996186
Q gi|254780148|r 59 RFFPGYVLIKAVMTD 73 (177)
Q Consensus 59 plfpgYiFv~~~~~~ 73 (177)
.+..+|++|+.+-.+
T Consensus 38 ~v~g~~l~v~~DG~~ 52 (127)
T d1wjsa_ 38 EVCGYRIKLHFDGYS 52 (127)
T ss_dssp EEETTEEEEEETTSC
T ss_pred EEECCEEEEEECCCC
T ss_conf 888999999968888
No 23
>d1vqoq1 b.34.5.1 (Q:1-95) Ribosomal proteins L21e {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=29.14 E-value=15 Score=14.56 Aligned_cols=52 Identities=19% Similarity=0.300 Sum_probs=36.2
Q ss_pred CCCCCCEEEEECC----------CCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEECHHHHEE
Q ss_conf 3478977999518----------77897199999828898899999816870478856787123
Q gi|254780148|r 122 FFEVGERVCVSDG----------PFASFNGIVKNVDEEKSRVHVEVVIFGRVTPVELAYNQVEK 175 (177)
Q Consensus 122 ~~~~G~~V~I~~G----------pf~g~~g~v~~i~~~~~r~~V~v~i~Gr~~~v~l~~~~iek 175 (177)
.|++||.|.|.-- -|.|..|.|....+ .-..|.+..-+++-.+-+-.+.|.+
T Consensus 32 ~y~~GD~V~I~idpsv~kGmPh~~yhGkTG~V~~~~g--~a~~V~v~~g~~~K~i~vr~eHlk~ 93 (95)
T d1vqoq1 32 EFDDGEKVHLKIDPSVPNGRFHPRFDGQTGTVEGKQG--DAYKVDIVDGGKEKTIIVTAAHLRR 93 (95)
T ss_dssp CCCTTCEEEECCCTTCCSSCCCGGGTTCEEEEEEEET--TEEEEEEEETTEEEEEEECGGGEEE
T ss_pred ECCCCCEEEEEECCCEECCCCCEEECCCCEEEEEECC--EEEEEEEECCCEEEEEEECHHHCCC
T ss_conf 6038989999846872518631034277545995557--5999999608746899970444456
No 24
>d1a8pa1 b.43.4.2 (A:2-100) Ferredoxin reductase (flavodoxin reductase) N-terminal domain {Azotobacter vinelandii [TaxId: 354]}
Probab=28.35 E-value=16 Score=14.48 Aligned_cols=18 Identities=22% Similarity=0.471 Sum_probs=15.1
Q ss_pred CCCCCCEEEEECCCCCCC
Q ss_conf 347897799951877897
Q gi|254780148|r 122 FFEVGERVCVSDGPFASF 139 (177)
Q Consensus 122 ~~~~G~~V~I~~Gpf~g~ 139 (177)
.+++||.|.|..||+-.+
T Consensus 81 ~l~~Gd~v~v~~gP~G~l 98 (99)
T d1a8pa1 81 HLKEGDELMVSRKPTGTL 98 (99)
T ss_dssp TCCTTCEEEEESCCBCSC
T ss_pred HCCCCCEEEECCCCCEEE
T ss_conf 489999999887995008
No 25
>d1mhna_ b.34.9.1 (A:) Survival motor neuron protein 1, smn {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.99 E-value=17 Score=14.33 Aligned_cols=51 Identities=14% Similarity=0.274 Sum_probs=35.9
Q ss_pred CCCCCCEEEEE---CCCCCCCEEEEEEECCCCCEEEEEEEECCCEEEEEECHHHHEEC
Q ss_conf 34789779995---18778971999998288988999998168704788567871233
Q gi|254780148|r 122 FFEVGERVCVS---DGPFASFNGIVKNVDEEKSRVHVEVVIFGRVTPVELAYNQVEKI 176 (177)
Q Consensus 122 ~~~~G~~V~I~---~Gpf~g~~g~v~~i~~~~~r~~V~v~i~Gr~~~v~l~~~~ieki 176 (177)
.+++|+.+... ||-| +.|.|.+++.+++.+.|.+.=+|..-.|. .++|.+.
T Consensus 3 ~wkvG~~C~A~~s~Dg~w--YRA~I~~v~~~~~~~~V~fvDYGn~e~V~--~~~l~~~ 56 (59)
T d1mhna_ 3 QWKVGDKCSAIWSEDGCI--YPATIASIDFKRETCVVVYTGYGNREEQN--LSDLLSP 56 (59)
T ss_dssp CCCTTCEEEEECTTTSCE--EEEEEEEEETTTTEEEEEETTTTEEEEEE--GGGCBCT
T ss_pred CCCCCCEEEEEECCCCCE--EEEEEEEECCCCCEEEEEEEECCCEEEEE--HHHCCCC
T ss_conf 688699999998878989--89999997488999999998089989988--9997698
No 26
>d1h3ga1 b.1.18.2 (A:3-95) Cyclomaltodextrinase, N-terminal domain {Flavobacterium sp. 92 [TaxId: 197856]}
Probab=26.68 E-value=15 Score=14.51 Aligned_cols=21 Identities=14% Similarity=0.259 Sum_probs=14.6
Q ss_pred EEEECCEECEEEEEEEECCCC
Q ss_conf 566412033099999961865
Q gi|254780148|r 54 VNSERRFFPGYVLIKAVMTDK 74 (177)
Q Consensus 54 ~~~~~plfpgYiFv~~~~~~~ 74 (177)
..+.+.==|+|+|+..+.+++
T Consensus 45 ~~v~~~eNpNYLFv~L~i~~~ 65 (93)
T d1h3ga1 45 VSTTRVPNANYLFVDLEIGPE 65 (93)
T ss_dssp EEEEECSSTTEEEEEEEECTT
T ss_pred EEEECCCCCCEEEEEEEECCC
T ss_conf 885837999889999996787
No 27
>d2qdyb1 b.34.4.4 (B:1-211) Iron-containing nitrile hydratase {Rhodococcus erythropolis [TaxId: 1833]}
Probab=22.95 E-value=20 Score=13.87 Aligned_cols=67 Identities=24% Similarity=0.277 Sum_probs=35.6
Q ss_pred CHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH--------HHHHHHCCCCCCCCCCEEEEEC----------CCC
Q ss_conf 2244420330366432788610025889999997653--------2221000012347897799951----------877
Q gi|254780148|r 75 VYHTIKDTPKVIGFLGTGENPSPVTDSEIEHIMNQVE--------AAVQRPVSSVFFEVGERVCVSD----------GPF 136 (177)
Q Consensus 75 ~~~~i~~t~gV~~~l~~~~~P~~i~~~ei~~l~~~~~--------~~~~~~~~~~~~~~G~~V~I~~----------Gpf 136 (177)
+||. +-+-++..+|-..+ .++.+|++...+..- .+...+.....|++||+|+|.+ +..
T Consensus 71 sYYe-~Wl~ale~lLvekG---~it~~EL~~~~~~~~~~~~~~~~~g~~~~~~~p~F~vGd~Vrv~~~~~~gHtRlP~Y~ 146 (211)
T d2qdyb1 71 PYYE-RYVIGVATLMVEKG---ILTQDELESLAGGPFPLSRPSESEGRPAPVETTTFEVGQRVRVRDEYVPGHIRMPAYC 146 (211)
T ss_dssp CHHH-HHHHHHHHHHHHTT---SSCHHHHHHHHTSCCCCCCCCSCCCCCCCSSCCCCCTTCEEEECCCCCSSCCSCCGGG
T ss_pred CHHH-HHHHHHHHHHHHCC---CCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHH
T ss_conf 8899-99999999999838---9789999643257886554112048987678986799998997647998740252666
Q ss_pred CCCEEEEEE
Q ss_conf 897199999
Q gi|254780148|r 137 ASFNGIVKN 145 (177)
Q Consensus 137 ~g~~g~v~~ 145 (177)
.|..|+|..
T Consensus 147 rgk~G~I~~ 155 (211)
T d2qdyb1 147 RGRVGTISH 155 (211)
T ss_dssp TTCEEEEEE
T ss_pred CCCEEEEEE
T ss_conf 698689986
No 28
>d1oz2a3 b.34.9.3 (A:422-527) Lethal(3)malignant brain tumor-like protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.88 E-value=20 Score=13.86 Aligned_cols=38 Identities=21% Similarity=0.294 Sum_probs=26.8
Q ss_pred CCCCCCCCEEEEEC--CCCCCCEEEEEEECCCCCEEEEEEEECC
Q ss_conf 12347897799951--8778971999998288988999998168
Q gi|254780148|r 120 SVFFEVGERVCVSD--GPFASFNGIVKNVDEEKSRVHVEVVIFG 161 (177)
Q Consensus 120 ~~~~~~G~~V~I~~--Gpf~g~~g~v~~i~~~~~r~~V~v~i~G 161 (177)
...|++|.++++++ -|..=..+.|.++.+ +++.|. +-|
T Consensus 25 ~~~F~~GmklEavd~~~~~~i~vAtV~~v~g--~~l~v~--~DG 64 (106)
T d1oz2a3 25 PHSFLVNMKLEAVDRRNPALIRVASVEDVED--HRIKIH--FDG 64 (106)
T ss_dssp CCCCCTTCEEEEECSSSTTCEEEEEEEEECS--SEEEEE--ETT
T ss_pred CCCCCCCCEEEEECCCCCCEEEEEEEEEEEC--CEEEEE--ECC
T ss_conf 4564048899987388986289899998789--999999--788
No 29
>d2zjrm1 b.34.5.6 (M:2-109) Ribosomal protein L19 {Deinococcus radiodurans [TaxId: 1299]}
Probab=22.56 E-value=20 Score=13.82 Aligned_cols=41 Identities=24% Similarity=0.458 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEE----CCC---CCCCEEEEEEEC
Q ss_conf 9997653222100001234789779995----187---789719999982
Q gi|254780148|r 105 HIMNQVEAAVQRPVSSVFFEVGERVCVS----DGP---FASFNGIVKNVD 147 (177)
Q Consensus 105 ~l~~~~~~~~~~~~~~~~~~~G~~V~I~----~Gp---f~g~~g~v~~i~ 147 (177)
++...++..... .-+.|.+||.|+|. +|. ..-|+|.+....
T Consensus 10 ~li~~ie~~~~k--~iP~f~~GDtV~V~~~i~Eg~k~RiQ~FeGvvI~~~ 57 (108)
T d2zjrm1 10 ELLRGIEQDHTR--QLPDFRPGDTVRVDTKVREGNRTRSQAFEGVVIAIN 57 (108)
T ss_dssp HHHHHTTGGGCC--CCCCCSSSEEEEEECCTTSSSCCCCEEEECCEEECC
T ss_pred HHHHHHHHHHCC--CCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEE
T ss_conf 999999998576--799848998999999975898650578889999982
Done!