PSIBLAST alignment of GI: 254780148 and protein with PDB id: 3qqc

>gi|326634532|pdb|3QQC|D Chain D, Crystal Structure Of Archaeal Spt45 BOUND TO THE RNAP CLAMP DOMAIN Length = 163

 Score = 47.0 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 49/155 (31%), Gaps = 31/155 (20%)

Query: 1   MTPRWYIVQVYSNCEKKAVESIGGRLSRSGLDHLVTEITIPSERVVSVRKGRKVNSERRF 60
           M  + + V+V    E+   + I  ++    L   +  I  PS                  
Sbjct: 1   MAGKIFAVRVTHGQEETTAKLIYSKVRTYNLP--IYAILAPSR----------------- 41

Query: 61  FPGYVLIKAVMTDKVYHTIKDTPKVIGFLGTGENPSPVTDSEIEHIMNQVEAAVQRPVSS 120
             GY+ ++A     V   I+      G L       P  + E           ++   + 
Sbjct: 42  VKGYIFVEAPNKGVVDEAIRGIRHARGVLPG---EVPFKEIEH---------FLEEKPAV 89

Query: 121 VFFEVGERVCVSDGPFASFNGIVKNVDEEKSRVHV 155
              E G+ V V  GPF      V  +DE K  V V
Sbjct: 90  SGLEPGDLVEVIAGPFKGQKAKVVKIDESKDEVVV 124