HHsearch alignment for GI: 254780150 and conserved domain: COG0378
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription].
Probab=97.97 E-value=9.4e-06 Score=54.73 Aligned_cols=154 Identities=17% Similarity=0.210 Sum_probs=80.8
Q ss_pred HHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC----CCC-CHHHHHC---CC---EEEEEEEE-----E-
Q ss_conf 242103882799999046898878999999876444200131----268-6869862---92---06378999-----8-
Q gi|254780150|r 4 KRYVRNKESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGD----IDS-APEEKLR---GI---TIATAHVS-----Y- 66 (392)
Q Consensus 4 ~~~~~~k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~----~D~-~~~E~~r---Gi---Ti~~~~~~-----~- 66 (392)
T Consensus 5 ~~a~~~~~~~~i~v~Gp~GSGKTaLie~~~~~L~~~~-~~aVI~~Di~t~~Da~~l~~~~g~~i~~v~TG~~CH~da~m~ 83 (202)
T COG0378 5 RLAEKNRPMLRIGVGGPPGSGKTALIEKTLRALKDEY-KIAVITGDIYTKEDADRLRKLPGEPIIGVETGKGCHLDASMN 83 (202)
T ss_pred HHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC-CEEEEECEEECHHHHHHHHHCCCCEEEEECCCCCCCCCHHHH
T ss_conf 5687258648999617998678999999999997527-768996404006559999737798068740387658867889
Q ss_pred ---------ECCCEEEEEEECCCCHHHHHHHHHHHHCCC-CEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf ---------219908999847873024677987740023-3145201234433210677888863187602331002333
Q gi|254780150|r 67 ---------ETDKRFYSHIDCPGHADYVKNMITGATQAD-GAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDA 136 (392)
Q Consensus 67 ---------~~~~~~i~iiD~PGH~~f~~~mi~g~~~~D-~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~ 136 (392)
T Consensus 84 ~~ai~~l~~~~~~~Dll~iEs~G--NL~~~~--sp~L~d~~~v~VidvteGe~~P~K~gP~i~~----aDl-lVInK~DL 154 (202)
T COG0378 84 LEAIEELVLDFPDLDLLFIESVG--NLVCPF--SPDLGDHLRVVVIDVTEGEDIPRKGGPGIFK----ADL-LVINKTDL 154 (202)
T ss_pred HHHHHHHHHCCCCCCEEEEECCC--CEECCC--CCCHHHCEEEEEEECCCCCCCCCCCCCCEEE----EEE-EEEEHHHH
T ss_conf 99999986317767789992376--432446--8041304699999878888876557996467----418-99856773
Q ss_pred CCCHH-HHHHCCCCCCEEEEEEEEEEEEECCCCEEEEE
Q ss_conf 56122-21101232100111014532210233114676
Q gi|254780150|r 137 VDDDE-LLDISEYEIRDLLKEHKYSDDTPIIRGSALCA 173 (392)
Q Consensus 137 v~~~~-~~~~i~~~i~~~l~~~~~~~~~pii~~sa~~g 173 (392)
T Consensus 155 a~~v~~dlevm~~da~~------~np~~~ii~~n~ktg 186 (202)
T COG0378 155 APYVGADLEVMARDAKE------VNPEAPIIFTNLKTG 186 (202)
T ss_pred HHHHCCCHHHHHHHHHH------HCCCCCEEEEECCCC
T ss_conf 87728669999999998------499998899847878