HHsearch alignment for GI: 254780150 and conserved domain: COG0552

>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion].
Probab=96.76  E-value=0.013  Score=35.18  Aligned_cols=120  Identities=23%  Similarity=0.385  Sum_probs=68.7

Q ss_pred             CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHC----CCCCCC------CHH--HHHCCCEEEEE-------EEEE----
Q ss_conf             882799999046898878999999876444200----131268------686--98629206378-------9998----
Q gi|254780150|r   10 KESLGLSTIGHVDHGKTTLTAAITKYYSEEKKE----YGDIDS------APE--EKLRGITIATA-------HVSY----   66 (392)
Q Consensus        10 k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~----~~~~D~------~~~--E~~rGiTi~~~-------~~~~----   66 (392)
T Consensus       138 ~p~V-il~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er-~gv~vI~~~~G~DpAaVafDAi~  215 (340)
T COG0552         138 KPFV-ILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGER-LGVPVISGKEGADPAAVAFDAIQ  215 (340)
T ss_pred             CCEE-EEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHH-HCCEEECCCCCCCCHHHHHHHHH
T ss_conf             8679-999934888637179999999997898699982334789999999999999-59927825999980899999999


Q ss_pred             --ECCCEEEEEEECCC--C--HHHHHHH---HHHHHCCCC-----EEEEECCCCCCCC--CHHHHHHHHHHCCCCCEEEE
Q ss_conf             --21990899984787--3--0246779---877400233-----1452012344332--10677888863187602331
Q gi|254780150|r   67 --ETDKRFYSHIDCPG--H--ADYVKNM---ITGATQADG-----AILVCAAEDGPKP--QTREHILLARQIGISSIVVY  130 (392)
Q Consensus        67 --~~~~~~i~iiD~PG--H--~~f~~~m---i~g~~~~D~-----ailvVda~~G~~~--QT~eh~~l~~~lgi~~iIv~  130 (392)
T Consensus       216 ~Akar~~DvvliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~---F~eav~l~-GiI-  290 (340)
T COG0552         216 AAKARGIDVVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKI---FNEAVGLD-GII-  290 (340)
T ss_pred             HHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHH---HHHHCCCC-EEE-
T ss_conf             9997699999996755445736689999999998464568998428999775647568999999---98752886-699-


Q ss_pred             ECCCCC
Q ss_conf             002333
Q gi|254780150|r  131 MNKVDA  136 (392)
Q Consensus       131 iNKmD~  136 (392)
T Consensus       291 lTKlDg  296 (340)
T COG0552         291 LTKLDG  296 (340)
T ss_pred             EEECCC
T ss_conf             970246