HHsearch alignment for GI: 254780150 and conserved domain: COG1419
>COG1419 FlhF Flagellar GTP-binding protein [Cell motility and secretion].
Probab=96.72 E-value=0.012 Score=35.41 Aligned_cols=124 Identities=20% Similarity=0.219 Sum_probs=73.0
Q ss_pred EEEEEEEECCCCCHHHHHHHHHHHHH--HHHHC--CCCCCCC---HHHHH------CCCEEEEEEEE--E-----ECCCE
Q ss_conf 27999990468988789999998764--44200--1312686---86986------29206378999--8-----21990
Q gi|254780150|r 12 SLGLSTIGHVDHGKTTLTAAITKYYS--EEKKE--YGDIDSA---PEEKL------RGITIATAHVS--Y-----ETDKR 71 (392)
Q Consensus 12 ~~ni~~iGhvd~GKSTL~~~L~~~~~--~~~~~--~~~~D~~---~~E~~------rGiTi~~~~~~--~-----~~~~~ 71 (392)
T Consensus 203 ~~vi~LVGPTGVGKTTTlAKLAar~~~~~~~~kVaiITtDtYRIGA~EQLk~Ya~im~vp~~vv~~~~el~~ai~~l~~~ 282 (407)
T COG1419 203 KRVIALVGPTGVGKTTTLAKLAARYVMLKKKKKVAIITTDTYRIGAVEQLKTYADIMGVPLEVVYSPKELAEAIEALRDC 282 (407)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCC
T ss_conf 85799989988758879999999997532576068997144115289999999998699559963999999999985318
Q ss_pred EEEEEECCCC--HHH--HHHHHHHH--HCCCCEEEEECCCCCCCCCHH-HHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 8999847873--024--67798774--002331452012344332106-77888863187602331002333561
Q gi|254780150|r 72 FYSHIDCPGH--ADY--VKNMITGA--TQADGAILVCAAEDGPKPQTR-EHILLARQIGISSIVVYMNKVDAVDD 139 (392)
Q Consensus 72 ~i~iiD~PGH--~~f--~~~mi~g~--~~~D~ailvVda~~G~~~QT~-eh~~l~~~lgi~~iIv~iNKmD~v~~ 139 (392)
T Consensus 283 d~ILVDTaGrs~~D~~~i~el~~~~~~~~~i~~~Lvlsat~--K~~dlkei~~~f~~~~i~~~I--~TKlDET~s 353 (407)
T COG1419 283 DVILVDTAGRSQYDKEKIEELKELIDVSHSIEVYLVLSATT--KYEDLKEIIKQFSLFPIDGLI--FTKLDETTS 353 (407)
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCC--CHHHHHHHHHHHCCCCCCEEE--EECCCCCCC
T ss_conf 88999689988337899999999970356621799984576--468899999972458866168--971335676