HHsearch alignment for GI: 254780150 and conserved domain: KOG0088

Probab=91.24  E-value=0.91  Score=23.83  Aligned_cols=108  Identities=19%  Similarity=0.204  Sum_probs=61.1

Q ss_pred             EEEEEEECCCCCHHHHHHHHHH-HHHHHHHCCCCCCCCHHHHHCCCEEEEEEE----EEECCCEEEEEEECCCCHHHHH-
Q ss_conf             7999990468988789999998-764442001312686869862920637899----9821990899984787302467-
Q gi|254780150|r   13 LGLSTIGHVDHGKTTLTAAITK-YYSEEKKEYGDIDSAPEEKLRGITIATAHV----SYETDKRFYSHIDCPGHADYVK-   86 (392)
Q Consensus        13 ~ni~~iGhvd~GKSTL~~~L~~-~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~----~~~~~~~~i~iiD~PGH~~f~~-   86 (392)
T Consensus        14 FK~VLLGEGCVGKtSLVLRy~EnkFn~-----------kH----lsTlQASF~~kk~n~ed~ra~L~IWDTAGQErfHAL   78 (218)
T KOG0088          14 FKIVLLGEGCVGKTSLVLRYVENKFNC-----------KH----LSTLQASFQNKKVNVEDCRADLHIWDTAGQERFHAL   78 (218)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHCCH-----------HH----HHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHCC
T ss_conf             689997487556068999998723230-----------46----789998876330462111311432124445765235


Q ss_pred             -HHHHHHHCCCCEEEEECCCCCCCCCH--HHHHHHHHHCCCC-CEEEEECCCCCC
Q ss_conf             -79877400233145201234433210--6778888631876-023310023335
Q gi|254780150|r   87 -NMITGATQADGAILVCAAEDGPKPQT--REHILLARQIGIS-SIVVYMNKVDAV  137 (392)
Q Consensus        87 -~mi~g~~~~D~ailvVda~~G~~~QT--~eh~~l~~~lgi~-~iIv~iNKmD~v  137 (392)
T Consensus        79 GPIY--YRgSnGalLVyDITDrdSFqKVKnWV~Elr~mlGnei~l~IVGNKiDLE  131 (218)
T KOG0088          79 GPIY--YRGSNGALLVYDITDRDSFQKVKNWVLELRTMLGNEIELLIVGNKIDLE  131 (218)
T ss_pred             CCEE--EECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
T ss_conf             7537--7079962899864446889999999999998718835999953744678