HHsearch alignment for GI: 254780150 and conserved domain: PRK12312
>PRK12312 infB translation initiation factor IF-2; Provisional.
Probab=97.96 E-value=6.5e-06 Score=55.75 Aligned_cols=91 Identities=14% Similarity=0.218 Sum_probs=74.3
Q ss_pred CCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf 22100001100000001355445430148742453489679995068743212541210012114432100136664112
Q gi|254780150|r 200 PQRSLDAPFLMHIEGSCGIEGRGTVVTGCIKRGRIKAGSDVEIIGMGGKKLKVKCTDVEMFRKKLDEAIAGDNVGLLLRG 279 (392)
Q Consensus 200 p~~~~~~p~r~~I~~vf~i~g~G~Vv~GrV~sG~l~~Gd~i~i~p~~~~~~~~kv~si~~~~~~v~~a~aGd~v~l~Lkg 279 (392)
T Consensus 511 p~~~E~~iG~AeV~~vF~~sk~g~IAGc~V~~G~i~r~~~vRVlR~~~vI~eG~I~SLrr~KddVkEV~~G~ECGI~l~~ 590 (610)
T PRK12312 511 PVYEEVVIGQAEVRKLFKHSKVGTIAGCYVTSGKVKRNAKVRVIRNGKVIHEGKIASLKHLKDDVKEVEKGKECGIHIKN 590 (610)
T ss_pred CCEEEEEEEEEEEEEEEECCCCEEEEEEEEEECEEEECCEEEEEECCEEEEEEEEHHHHHCCCCCCHHCCCCCCEEEECC
T ss_conf 72479998999988888648861789999974689719848998899999971677740201021120589532488327
Q ss_pred CCCCEEECHHEEE
Q ss_conf 4543220211773
Q gi|254780150|r 280 VNRADVPRGRVVC 292 (392)
Q Consensus 280 i~~~di~rGdvl~ 292 (392)
T Consensus 591 --f~di~~GDiIE 601 (610)
T PRK12312 591 --FNDIKENDIIE 601 (610)
T ss_pred --CCCCCCCCEEE
T ss_conf --35687698999