HHsearch alignment for GI: 254780150 and conserved domain: PTZ00132
>PTZ00132 GTP-binding nuclear protein; Provisional.
Probab=98.69 E-value=5.8e-08 Score=68.45 Aligned_cols=138 Identities=18% Similarity=0.166 Sum_probs=82.9
Q ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEE--EEEEEEEECCC--EEEEEEECCCCHHHHH
Q ss_conf 8279999904689887899999987644420013126868698629206--37899982199--0899984787302467
Q gi|254780150|r 11 ESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITI--ATAHVSYETDK--RFYSHIDCPGHADYVK 86 (392)
Q Consensus 11 ~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi--~~~~~~~~~~~--~~i~iiD~PGH~~f~~ 86 (392)
T Consensus 5 p~~KIvllGd~~VGKTsLi~r~~~~~------------F~~--~y~pTig~d~~~~~~~~~~~~i~l~IwDTaGqe~f~s 70 (209)
T PTZ00132 5 AQFKLILVGDGGVGKTTFVKRHLTGE------------FEK--KYIATLGVEVHPLKFYTNRGKICFNVWDTAGQEKFGG 70 (209)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHCC------------CCC--CCCCCCCEEEEEEEEEECCEEEEEEEEECCCCCCCCC
T ss_conf 76899999999967899999997199------------699--8777602798999999999999999998999744556
Q ss_pred HHHH-HHHCCCCEEEEECCCCCCCCCHHHHH-----HHHHH-CCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEE
Q ss_conf 7987-74002331452012344332106778-----88863-18760233100233356122211012321001110145
Q gi|254780150|r 87 NMIT-GATQADGAILVCAAEDGPKPQTREHI-----LLARQ-IGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKY 159 (392)
Q Consensus 87 ~mi~-g~~~~D~ailvVda~~G~~~QT~eh~-----~l~~~-lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~ 159 (392)
T Consensus 71 -l~~~yyr~a~~~ilVfDit~---~~SF~~l~~W~~ei~~~~~~ip-ivLVGNK~DL~~r~--V--~~~~~-~~a~~~-- 138 (209)
T PTZ00132 71 -LRDGYYIKGQCAIIMFDVTS---RITYKNVPNWHRDITRVCENIP-IVLVGNKVDVKDRQ--V--KAKQI-TFHRKK-- 138 (209)
T ss_pred -CCCHHHCCCCEEEEEECCCC---HHHHHHHHHHHHHHHHHCCCCC-EEEEEECCCCCCCC--C--CHHHH-HHHHHC--
T ss_conf -65144248988999843788---7899999999999998689987-89997623224135--5--79999-999987--
Q ss_pred EEEEECCCCEEEEEEEC
Q ss_conf 32210233114676411
Q gi|254780150|r 160 SDDTPIIRGSALCALQG 176 (392)
Q Consensus 160 ~~~~pii~~sa~~g~~~ 176 (392)
T Consensus 139 --~~~f~EtSAKtg~NV 153 (209)
T PTZ00132 139 --NLQYYDISAKSNYNF 153 (209)
T ss_pred --CCEEEEEECCCCCCH
T ss_conf --998999726899397