HHsearch alignment for GI: 254780150 and conserved domain: TIGR01007
>TIGR01007 eps_fam capsular exopolysaccharide family; InterPro: IPR005702 This family describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis (EPS). At least 13 genes EpsA to EpsM in streptococcus species seem to direct the EPS proteins and share high homology. ; GO: 0030234 enzyme regulator activity, 0045227 capsule polysaccharide biosynthetic process.
Probab=94.73 E-value=0.067 Score=30.86 Aligned_cols=120 Identities=26% Similarity=0.264 Sum_probs=67.0
Q ss_pred EEEE-ECCCCCHHHHHHHHHHHHHHHHHCCCCCCC-----------CHHHHHCCCEEEEE----------EEEE-E----
Q ss_conf 9999-046898878999999876444200131268-----------68698629206378----------9998-2----
Q gi|254780150|r 15 LSTI-GHVDHGKTTLTAAITKYYSEEKKEYGDIDS-----------APEEKLRGITIATA----------HVSY-E---- 67 (392)
Q Consensus 15 i~~i-Ghvd~GKSTL~~~L~~~~~~~~~~~~~~D~-----------~~~E~~rGiTi~~~----------~~~~-~---- 67 (392)
T Consensus 22 l~itS~~~~eGKsT~S~NiA~~fAqaGyKTLlIDgD~R~sv~~~~Fk~~n~~~GLtn~L~g~~dl~~~i~~T~isenL~v 101 (207)
T TIGR01007 22 LLITSVKAGEGKSTTSANIAVSFAQAGYKTLLIDGDMRNSVMSGTFKSQNKIKGLTNFLSGNTDLSDAICETNISENLDV 101 (207)
T ss_pred EEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHCCCCCCCCEE
T ss_conf 99841105888624107889999856855888754658660367865888765633322145453334202654678727
Q ss_pred --------------------------CCCEEEEEEECCCCHHHHHHHHHHH---HCCCCEEEEECCCCCCCCCHHHHHHH
Q ss_conf --------------------------1990899984787302467798774---00233145201234433210677888
Q gi|254780150|r 68 --------------------------TDKRFYSHIDCPGHADYVKNMITGA---TQADGAILVCAAEDGPKPQTREHILL 118 (392)
Q Consensus 68 --------------------------~~~~~i~iiD~PGH~~f~~~mi~g~---~~~D~ailvVda~~G~~~QT~eh~~l 118 (392)
T Consensus 102 i~sG~vPPNPt~LL~s~~F~~l~e~~~~~fD~iiiDTPP----ig~V~DAai~a~~~d~~~LV~~A~~~~k~~v~KAK~~ 177 (207)
T TIGR01007 102 ITSGPVPPNPTELLQSSNFKTLIETLRKYFDYIIIDTPP----IGTVIDAAIIARAVDASILVTDAGKIKKREVKKAKEQ 177 (207)
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECC----CCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 517887877547888899999999987168889995188----6667889999987297798872253264678999999
Q ss_pred HHHCCCCCEEEEECCCCCCC
Q ss_conf 86318760233100233356
Q gi|254780150|r 119 ARQIGISSIVVYMNKVDAVD 138 (392)
Q Consensus 119 ~~~lgi~~iIv~iNKmD~v~ 138 (392)
T Consensus 178 LEq~G~~~LGvvLNK~d~s~ 197 (207)
T TIGR01007 178 LEQAGSKFLGVVLNKVDISV 197 (207)
T ss_pred HHHHCCCEEEEEECCCCCCC
T ss_conf 98617841158888825765