HHsearch alignment for GI: 254780150 and conserved domain: TIGR01007

>TIGR01007 eps_fam capsular exopolysaccharide family; InterPro: IPR005702 This family describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis (EPS). At least 13 genes EpsA to EpsM in streptococcus species seem to direct the EPS proteins and share high homology. ; GO: 0030234 enzyme regulator activity, 0045227 capsule polysaccharide biosynthetic process.
Probab=94.73  E-value=0.067  Score=30.86  Aligned_cols=120  Identities=26%  Similarity=0.264  Sum_probs=67.0

Q ss_pred             EEEE-ECCCCCHHHHHHHHHHHHHHHHHCCCCCCC-----------CHHHHHCCCEEEEE----------EEEE-E----
Q ss_conf             9999-046898878999999876444200131268-----------68698629206378----------9998-2----
Q gi|254780150|r   15 LSTI-GHVDHGKTTLTAAITKYYSEEKKEYGDIDS-----------APEEKLRGITIATA----------HVSY-E----   67 (392)
Q Consensus        15 i~~i-Ghvd~GKSTL~~~L~~~~~~~~~~~~~~D~-----------~~~E~~rGiTi~~~----------~~~~-~----   67 (392)
T Consensus        22 l~itS~~~~eGKsT~S~NiA~~fAqaGyKTLlIDgD~R~sv~~~~Fk~~n~~~GLtn~L~g~~dl~~~i~~T~isenL~v  101 (207)
T TIGR01007        22 LLITSVKAGEGKSTTSANIAVSFAQAGYKTLLIDGDMRNSVMSGTFKSQNKIKGLTNFLSGNTDLSDAICETNISENLDV  101 (207)
T ss_pred             EEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHCCCCCCCCEE
T ss_conf             99841105888624107889999856855888754658660367865888765633322145453334202654678727


Q ss_pred             --------------------------CCCEEEEEEECCCCHHHHHHHHHHH---HCCCCEEEEECCCCCCCCCHHHHHHH
Q ss_conf             --------------------------1990899984787302467798774---00233145201234433210677888
Q gi|254780150|r   68 --------------------------TDKRFYSHIDCPGHADYVKNMITGA---TQADGAILVCAAEDGPKPQTREHILL  118 (392)
Q Consensus        68 --------------------------~~~~~i~iiD~PGH~~f~~~mi~g~---~~~D~ailvVda~~G~~~QT~eh~~l  118 (392)
T Consensus       102 i~sG~vPPNPt~LL~s~~F~~l~e~~~~~fD~iiiDTPP----ig~V~DAai~a~~~d~~~LV~~A~~~~k~~v~KAK~~  177 (207)
T TIGR01007       102 ITSGPVPPNPTELLQSSNFKTLIETLRKYFDYIIIDTPP----IGTVIDAAIIARAVDASILVTDAGKIKKREVKKAKEQ  177 (207)
T ss_pred             ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECC----CCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH
T ss_conf             517887877547888899999999987168889995188----6667889999987297798872253264678999999


Q ss_pred             HHHCCCCCEEEEECCCCCCC
Q ss_conf             86318760233100233356
Q gi|254780150|r  119 ARQIGISSIVVYMNKVDAVD  138 (392)
Q Consensus       119 ~~~lgi~~iIv~iNKmD~v~  138 (392)
T Consensus       178 LEq~G~~~LGvvLNK~d~s~  197 (207)
T TIGR01007       178 LEQAGSKFLGVVLNKVDISV  197 (207)
T ss_pred             HHHHCCCEEEEEECCCCCCC
T ss_conf             98617841158888825765