HHsearch alignment for GI: 254780150 and conserved domain: TIGR01393
>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297 LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu. Two types of phylogenetic tree, rooted by other GTP-binding proteins, suggest that eukaryotic homologs (including GUF1 of yeast) originated within the bacterial LepA family. The function of the proteins in this family are unknown. ; GO: 0005525 GTP binding.
Probab=100.00 E-value=0 Score=412.02 Aligned_cols=265 Identities=27% Similarity=0.389 Sum_probs=221.9
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHH---HHHCCCCCCCCHHHHHCCCEEEEEEEEE------ECCCEEEEEEECCCCHHH
Q ss_conf 9999904689887899999987644---4200131268686986292063789998------219908999847873024
Q gi|254780150|r 14 GLSTIGHVDHGKTTLTAAITKYYSE---EKKEYGDIDSAPEEKLRGITIATAHVSY------ETDKRFYSHIDCPGHADY 84 (392)
Q Consensus 14 ni~~iGhvd~GKSTL~~~L~~~~~~---~~~~~~~~D~~~~E~~rGiTi~~~~~~~------~~~~~~i~iiD~PGH~~f 84 (392)
T Consensus 5 NFsIIAHIDHGKSTLADRlle~T~~~s~R~m~~Q~LD~MDlERERGITIK~qaV~l~Yk~~~DGe~Y~LNLIDTPGHVDF 84 (598)
T TIGR01393 5 NFSIIAHIDHGKSTLADRLLEKTGAVSEREMREQVLDSMDLERERGITIKAQAVRLKYKVAKDGETYVLNLIDTPGHVDF 84 (598)
T ss_pred CEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCEEECCCCEEECCCEEEEEEEECCCCEEEEEEECCCCCCCC
T ss_conf 26788462489324889999861745620254305775100000582011563475337533887889964528897212
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEEE
Q ss_conf 67798774002331452012344332106778888631876023310023335612221101232100111014532210
Q gi|254780150|r 85 VKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSDDTP 164 (392)
Q Consensus 85 ~~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~~~p 164 (392)
T Consensus 85 sYEVSRSLAACEGALL~VDA~QGvEAQT~aN~YlAlE~dLe-IIPViNKIDLP~Ad--pe~v~~eIe~~iG---ld-~~~ 157 (598)
T TIGR01393 85 SYEVSRSLAACEGALLLVDAAQGVEAQTLANVYLALENDLE-IIPVINKIDLPSAD--PERVKKEIEEVIG---LD-ASE 157 (598)
T ss_pred CHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCE-EEEEECCCCCCCCC--HHHHHHHHHHHCC---CC-CCC
T ss_conf 73788888871640356141032358889999887561875-84778253688888--5899998765418---89-643
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCC-CCCCEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEE
Q ss_conf 23311467641144456521233203443102522221000-01100000001355445430148742453489679995
Q gi|254780150|r 165 IIRGSALCALQGTNKELGEDSIHALMKAVDTHIPTPQRSLD-APFLMHIEGSCGIEGRGTVVTGCIKRGRIKAGSDVEII 243 (392)
Q Consensus 165 ii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~~~~p~~~~~-~p~r~~I~~vf~i~g~G~Vv~GrV~sG~l~~Gd~i~i~ 243 (392)
T Consensus 158 ai~~SAKtG~----------Gi~e~LEaIv~~vPpP~Gd~~DapLkALIFDS~YD~YrGVv~~vRv~~G~ik~gD~I~~M 227 (598)
T TIGR01393 158 AILASAKTGI----------GIEEILEAIVKRVPPPKGDPDDAPLKALIFDSHYDNYRGVVVLVRVFEGTIKKGDKIRFM 227 (598)
T ss_pred CEEEEECCCC----------CHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECEECCCCEEEEE
T ss_conf 0387503678----------889998897101810011388866322788435438650899999952686469889995
Q ss_pred ECCCCCCCEEEECCCCC-C-CCCCCCCCCHHHHHHHCCC-CCCEEECHHEEECCCCC
Q ss_conf 06874321254121001-2-1144321001366641124-54322021177326777
Q gi|254780150|r 244 GMGGKKLKVKCTDVEMF-R-KKLDEAIAGDNVGLLLRGV-NRADVPRGRVVCAPGSI 297 (392)
Q Consensus 244 p~~~~~~~~kv~si~~~-~-~~v~~a~aGd~v~l~Lkgi-~~~di~rGdvl~~~~~~ 297 (392)
T Consensus 228 stgk~y~V~evG-~~~P~~~~~~~~L~aGe-VGy~~AgIK~v~D~~VGDTiT~~~~P 282 (598)
T TIGR01393 228 STGKEYEVDEVG-VFTPKLEVKTQELSAGE-VGYIIAGIKDVSDVKVGDTITSVKNP 282 (598)
T ss_pred ECCCEEEEEEEE-EECCCCCCCCCCEECCC-EEEEEEEEEECCCEECCCEEECCCCC
T ss_conf 348766675500-34345201466200163-05999865310411205445256787