HHsearch alignment for GI: 254780150 and conserved domain: cd01879
>cd01879 FeoB Ferrous iron transport protein B (FeoB) subfamily. E. coli has an iron(II) transport system, known as feo, which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.
Probab=99.63 E-value=6.1e-16 Score=117.90 Aligned_cols=146 Identities=21% Similarity=0.316 Sum_probs=92.8
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCHHH---------HHH
Q ss_conf 99046898878999999876444200131268686986292063789998219908999847873024---------677
Q gi|254780150|r 17 TIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETDKRFYSHIDCPGHADY---------VKN 87 (392)
Q Consensus 17 ~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~~~~i~iiD~PGH~~f---------~~~ 87 (392)
T Consensus 1 ivG~pNvGKSTL~N~L~g~~~~-------vs~-----~pgtTrd~~~~~~~~~~~~~~lvDtpGi~~~~~~~~~e~i~~~ 68 (158)
T cd01879 1 LVGNPNVGKTTLFNALTGARQK-------VGN-----WPGVTVEKKEGRFKLGGKEIEIVDLPGTYSLSPYSEDEKVARD 68 (158)
T ss_pred CCCCCCCCHHHHHHHHHCCCCE-------ECC-----CCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 9798988899999999599864-------617-----8982763478899629937999979874125641356789999
Q ss_pred HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEEECCC
Q ss_conf 98774002331452012344332106778888631876023310023335612221101232100111014532210233
Q gi|254780150|r 88 MITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSDDTPIIR 167 (392)
Q Consensus 88 mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~~~pii~ 167 (392)
T Consensus 69 ~~~~-~~~d~vl~vvD~~~-~~-~~l~~~~~l~~~~~p-~ivV~NK~D~~~~~~~~~~~-~~l~~~~-------~~~ii~ 136 (158)
T cd01879 69 FLLG-EKPDLIVNVVDATN-LE-RNLYLTLQLLELGLP-VVVALNMIDEAEKRGIKIDL-DKLSELL-------GVPVVP 136 (158)
T ss_pred HHHH-CCCCCEEEEEECCH-HH-HHHHHHHHHHHCCCC-EEEEEEHHHHHHHCCCHHHH-HHHHHHC-------CCCEEE
T ss_conf 9985-17871799977740-67-768999999865998-89994027765522546679-9999871-------994899
Q ss_pred CEEEEEEECCCCCCCCCCCCCHHHHHHCC
Q ss_conf 11467641144456521233203443102
Q gi|254780150|r 168 GSALCALQGTNKELGEDSIHALMKAVDTH 196 (392)
Q Consensus 168 ~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~ 196 (392)
T Consensus 137 iSA~~g~----------Gi~~L~~~i~el 155 (158)
T cd01879 137 TSARKGE----------GIDELKDAIAEL 155 (158)
T ss_pred EECCCCC----------CHHHHHHHHHHH
T ss_conf 9877897----------999999999998