HHsearch alignment for GI: 254780150 and conserved domain: cd01890
>cd01890 LepA LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and eukaryota (e.g. yeast GUF1p), but is missing from archaea. This pattern of phyletic distribution suggests that LepA evolved through a duplication of the EF-G gene in bacteria, followed by early transfer into the eukaryotic lineage, most likely from the promitochondrial endosymbiont. Yeast GUF1p is not essential and mutant cells did not reveal any marked phenotype.
Probab=100.00 E-value=2.8e-45 Score=299.96 Aligned_cols=170 Identities=29% Similarity=0.446 Sum_probs=140.3
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHH---HHHCCCCCCCCHHHHHCCCEEEEEEEEEECC-----CEEEEEEECCCCHHHH
Q ss_conf 9999904689887899999987644---4200131268686986292063789998219-----9089998478730246
Q gi|254780150|r 14 GLSTIGHVDHGKTTLTAAITKYYSE---EKKEYGDIDSAPEEKLRGITIATAHVSYETD-----KRFYSHIDCPGHADYV 85 (392)
Q Consensus 14 ni~~iGhvd~GKSTL~~~L~~~~~~---~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~-----~~~i~iiD~PGH~~f~ 85 (392)
T Consensus 2 NiaiiGHvd~GKTTL~~~ll~~tg~i~~~~~~~~~~D~~~~E~eRgiTi~~~~~~~~~~~~~~~~~~in~iDtPGh~dF~ 81 (179)
T cd01890 2 NFSIIAHIDHGKSTLADRLLELTGTVSKREMKEQVLDSMDLERERGITIKAQTVRLNYKAKDGQEYLLNLIDTPGHVDFS 81 (179)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEEECCCCCCEEEEEEECCCCCCCH
T ss_conf 59999489989899999999985995414573244165176786386687433688841367871489999899864517
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEEEC
Q ss_conf 77987740023314520123443321067788886318760233100233356122211012321001110145322102
Q gi|254780150|r 86 KNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSDDTPI 165 (392)
Q Consensus 86 ~~mi~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~~~pi 165 (392)
T Consensus 82 ~~~~~al~~~D~allVVda~~Gv~~qT~~~~~~a~~~~~p-~ivviNKiD~~~ad--~~~v~~~i~~~~g---~~-~~~~ 154 (179)
T cd01890 82 YEVSRSLAACEGALLLVDATQGVEAQTLANFYLALENNLE-IIPVINKIDLPSAD--PERVKQQIEDVLG---LD-PSEA 154 (179)
T ss_pred HHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCC-EEEEEECCCCCCCC--HHHHHHHHHHHHC---CC-CCCE
T ss_conf 7898899754427899864778737489999999876998-89998655567789--9999999999868---89-7674
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 33114676411444565212332034431025222
Q gi|254780150|r 166 IRGSALCALQGTNKELGEDSIHALMKAVDTHIPTP 200 (392)
Q Consensus 166 i~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~~~~p 200 (392)
T Consensus 155 v~vSA~~g~----------gv~~Ll~~i~~~ip~p 179 (179)
T cd01890 155 ILVSAKTGL----------GVEDLLEAIVERIPPP 179 (179)
T ss_pred EEEECCCCC----------CHHHHHHHHHHHCCCC
T ss_conf 884378897----------9899999999648898