HHsearch alignment for GI: 254780150 and conserved domain: cd03114
>cd03114 ArgK-like The function of this protein family is unkown. The protein sequences are similar to the ArgK protein in E. coli. ArgK protein is a membrane ATPase which is required for transporting arginine, ornithine and lysine into the cells by the arginine and ornithine (AO system) and lysine, arginine and ornithine (LAO) transport systems.
Probab=97.69 E-value=0.00014 Score=47.39 Aligned_cols=112 Identities=24% Similarity=0.225 Sum_probs=66.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC---------------CCCHHHH---HCCCEEEE-EEE-----------
Q ss_conf 99990468988789999998764442001312---------------6868698---62920637-899-----------
Q gi|254780150|r 15 LSTIGHVDHGKTTLTAAITKYYSEEKKEYGDI---------------DSAPEEK---LRGITIAT-AHV----------- 64 (392)
Q Consensus 15 i~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~---------------D~~~~E~---~rGiTi~~-~~~----------- 64 (392)
T Consensus 2 iGitG~pGaGKStLi~~l~~~~~~~g~~VaVlavDPsS~~sgGalLGDRiRm~~~~~~~~vfiRs~atrg~~ggla~~~~ 81 (148)
T cd03114 2 IGITGVPGAGKSTLIDALITALRARGKRVAVLAIDPSSPFSGGAILGDRIRMERHASDPGVFIRSLATRGFLGGLSRATP 81 (148)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHH
T ss_conf 76258997878999999999999789837999968887866862032354534415799836863466665420468899
Q ss_pred ----EEECCCEEEEEEECCCCHHHHHHHH-HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf ----9821990899984787302467798-7740023314520123443321067788886318760233100233
Q gi|254780150|r 65 ----SYETDKRFYSHIDCPGHADYVKNMI-TGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYMNKVD 135 (392)
Q Consensus 65 ----~~~~~~~~i~iiD~PGH~~f~~~mi-~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~iNKmD 135 (392)
T Consensus 82 ~~i~~l~~~g~D~IiIETvGv----GQse~~i~~~aD~~i~v~~p~~GD~iQ~~----K~gi~e~aDl~-vvNK~D 148 (148)
T cd03114 82 EVIRVLDAAGFDVIIVETVGV----GQSEVDIASMADTTVVVMAPGAGDDIQAI----KAGIMEIADIV-VVNKAD 148 (148)
T ss_pred HHHHHHHHCCCCEEEEECCCC----CCCHHHHHHHCCEEEEEECCCCCCHHHHC----CCCHHHCCCEE-EEECCC
T ss_conf 999999975999899974877----75602655435669999636887377611----22852124699-993789