HHsearch alignment for GI: 254780150 and conserved domain: cd04129

>cd04129 Rho2 Rho2 subfamily. Rho2 is a fungal GTPase that plays a role in cell morphogenesis, control of cell wall integrity, control of growth polarity, and maintenance of growth direction. Rho2 activates the protein kinase C homolog Pck2, and Pck2 controls Mok1, the major (1-3) alpha-D-glucan synthase. Together with Rho1 (RhoA), Rho2 regulates the construction of the cell wall. Unlike Rho1, Rho2 is not an essential protein, but its overexpression is lethal. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for proper intracellular localization via membrane attachment. As with other Rho family GTPases, the GDP/GTP cycling is regulated by GEFs (guanine nucleotide exchange factors), GAPs (GTPase-activating proteins) and GDIs (guanine nucleotide dissociation inhibitors).
Probab=98.29  E-value=1.3e-06  Score=60.10  Aligned_cols=152  Identities=19%  Similarity=0.173  Sum_probs=83.3

Q ss_pred             EEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEE-EEECCC--EEEEEEECCCCHHHHHHHHH
Q ss_conf             999990468988789999998764442001312686869862920637899-982199--08999847873024677987
Q gi|254780150|r   14 GLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHV-SYETDK--RFYSHIDCPGHADYVKNMIT   90 (392)
Q Consensus        14 ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~-~~~~~~--~~i~iiD~PGH~~f~~~mi~   90 (392)
T Consensus         3 KivllGd~~VGKTsLi~r~~~~------------~f~~~--y~pTi~~~~~~~i~v~~~~v~l~iwDTaG~e~~~~~~~~   68 (187)
T cd04129           3 KLVIVGDGACGKTSLLSVFTLG------------EFPEE--YHPTVFENYVTDCRVDGKPVQLALWDTAGQEEYERLRPL   68 (187)
T ss_pred             EEEEECCCCCCHHHHHHHHHHC------------CCCCC--CCCCEEEEEEEEEEECCEEEEEEEEECCCCCCCCCCCCC
T ss_conf             9999998997689999999829------------89998--788667898999999999999999978887034546041


Q ss_pred             HHHCCCCEEEEECCCCCCCCCHHHHH-----HHHHHC--CCCCEEEEECCCCCCCCHHH----H-H-HC-CCCCCEEEEE
Q ss_conf             74002331452012344332106778-----888631--87602331002333561222----1-1-01-2321001110
Q gi|254780150|r   91 GATQADGAILVCAAEDGPKPQTREHI-----LLARQI--GISSIVVYMNKVDAVDDDEL----L-D-IS-EYEIRDLLKE  156 (392)
Q Consensus        91 g~~~~D~ailvVda~~G~~~QT~eh~-----~l~~~l--gi~~iIv~iNKmD~v~~~~~----~-~-~i-~~~i~~~l~~  156 (392)
T Consensus        69 ~~~~a~~~ilvydi~~~---~Sf~~~~~~w~~~~~~~~~~~p-iilVGnK~DL~~~~~~~~~~~~~r~V~~~~g~~~a~~  144 (187)
T cd04129          69 SYSKAHVILIGFAVDTP---DSLENVRTKWIEEVRRYCPNVP-VILVGLKKDLRQDAVAKEEYRTQRFVPIQQGKRVAKE  144 (187)
T ss_pred             EECCCCEEEEECCCCCH---HHHHHHHHHHHHHHHHHCCCCC-EEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHHHHHH
T ss_conf             23388589997026986---6799999999999998587998-8999886001134112111223155789999999998


Q ss_pred             EEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHCC
Q ss_conf             1453221023311467641144456521233203443102
Q gi|254780150|r  157 HKYSDDTPIIRGSALCALQGTNKELGEDSIHALMKAVDTH  196 (392)
Q Consensus       157 ~~~~~~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~~  196 (392)
T Consensus       145 ~~~---~~y~EtSAk~~~----------nV~e~F~~~~r~  171 (187)
T cd04129         145 IGA---KKYMECSALTGE----------GVDDVFEAATRA  171 (187)
T ss_pred             CCC---CEEEEECCCCCC----------CHHHHHHHHHHH
T ss_conf             499---789996889997----------989999999999