HHsearch alignment for GI: 254780150 and conserved domain: cd04135

>cd04135 Tc10 TC10 subfamily. TC10 is a Rho family protein that has been shown to induce microspike formation and neurite outgrowth in vitro. Its expression changes dramatically after peripheral nerve injury, suggesting an important role in promoting axonal outgrowth and regeneration. TC10 regulates translocation of insulin-stimulated GLUT4 in adipocytes and has also been shown to bind directly to Golgi COPI coat proteins. GTP-bound TC10 in vitro can bind numerous potential effectors. Depending on its subcellular localization and distinct functional domains, TC10 can differentially regulate two types of filamentous actin in adipocytes. TC10 mRNAs are highly expressed in three types of mouse muscle tissues: leg skeletal muscle, cardiac muscle, and uterus; they were also present in brain, with higher levels in adults than in newborns. TC10 has also been shown to play a role in regulating the expression of cystic fibrosis transmembrane conductance regulator (CFTR) through interacti
Probab=98.46  E-value=4.2e-07  Score=63.13  Aligned_cols=144  Identities=19%  Similarity=0.153  Sum_probs=80.0

Q ss_pred             EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEE-E--EECCCEEEEEEECCCCHHHHHHHH
Q ss_conf             7999990468988789999998764442001312686869862920637899-9--821990899984787302467798
Q gi|254780150|r   13 LGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHV-S--YETDKRFYSHIDCPGHADYVKNMI   89 (392)
Q Consensus        13 ~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~-~--~~~~~~~i~iiD~PGH~~f~~~mi   89 (392)
T Consensus         1 ~Kiv~vGd~~VGKTsli~rf~~~~------------f~~~--y~pTi~~~~~~~i~v~~~~~~l~i~DTaG~e~~~~~~~   66 (174)
T cd04135           1 LKCVVVGDGAVGKTCLLMSYANDA------------FPEE--YVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRP   66 (174)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHCC------------CCCC--CCCEEEEEEEEEEEECCEEEEEEEEECCCCCCCHHHHH
T ss_conf             989999989985999999996298------------9988--68857520227999999999999997976403155659


Q ss_pred             HHHHCCCCEEEEECCCC-CCCCCHHHHH-HHHHH--CCCCCEEEEECCCCCCCCHHHHH---------HCCCCCCEEEEE
Q ss_conf             77400233145201234-4332106778-88863--18760233100233356122211---------012321001110
Q gi|254780150|r   90 TGATQADGAILVCAAED-GPKPQTREHI-LLARQ--IGISSIVVYMNKVDAVDDDELLD---------ISEYEIRDLLKE  156 (392)
Q Consensus        90 ~g~~~~D~ailvVda~~-G~~~QT~eh~-~l~~~--lgi~~iIv~iNKmD~v~~~~~~~---------~i~~~i~~~l~~  156 (392)
T Consensus        67 ~~~~~a~~~ilvydi~~~~Sf~~~~~~w~~~~~~~~~~~p-iilvgnK~DL~~~~~~~~~~~~~~~r~Vs~eeg~~~A~~  145 (174)
T cd04135          67 LSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVP-YLLVGTQIDLRDDPKTLARLNDMKEKPVTVEQGQKLAKE  145 (174)
T ss_pred             HHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC-EEEEEECHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf             9855787678984379778899999999999998684998-899968523004434554530045766399999999997


Q ss_pred             EEEEEEEECCCCEEEEEE
Q ss_conf             145322102331146764
Q gi|254780150|r  157 HKYSDDTPIIRGSALCAL  174 (392)
Q Consensus       157 ~~~~~~~pii~~sa~~g~  174 (392)
T Consensus       146 ~g~---~~f~E~SAkt~~  160 (174)
T cd04135         146 IGA---HCYVECSALTQK  160 (174)
T ss_pred             CCC---CEEEEECCCCCC
T ss_conf             799---899990548794