HHsearch alignment for GI: 254780150 and conserved domain: cd04145

>cd04145 M_R_Ras_like M-Ras/R-Ras-like subfamily. This subfamily contains R-Ras2/TC21, M-Ras/R-Ras3, and related members of the Ras family. M-Ras is expressed in lympho-hematopoetic cells. It interacts with some of the known Ras effectors, but appears to also have its own effectors. Expression of mutated M-Ras leads to transformation of several types of cell lines, including hematopoietic cells, mammary epithelial cells, and fibroblasts. Overexpression of M-Ras is observed in carcinomas from breast, uterus, thyroid, stomach, colon, kidney, lung, and rectum. In addition, expression of a constitutively active M-Ras mutant in murine bone marrow induces a malignant mast cell leukemia that is distinct from the monocytic leukemia induced by H-Ras. TC21, along with H-Ras, has been shown to regulate the branching morphogenesis of ureteric bud cell branching in mice. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an ali
Probab=98.84  E-value=1.2e-08  Score=72.76  Aligned_cols=142  Identities=20%  Similarity=0.231  Sum_probs=84.3

Q ss_pred             CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEE-EEEC--CCEEEEEEECCCCHHHHHH
Q ss_conf             827999990468988789999998764442001312686869862920637899-9821--9908999847873024677
Q gi|254780150|r   11 ESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHV-SYET--DKRFYSHIDCPGHADYVKN   87 (392)
Q Consensus        11 ~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~-~~~~--~~~~i~iiD~PGH~~f~~~   87 (392)
T Consensus         1 pt~Kiv~lGd~~VGKTsli~r~~~~~------------f~~~--y~~Ti~~~~~k~~~~~~~~~~l~iwDtaG~e~~~~~   66 (164)
T cd04145           1 PTYKLVVVGGGGVGKSALTIQFIQSY------------FVTD--YDPTIEDSYTKQCEIDGQWAILDILDTAGQEEFSAM   66 (164)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHCCC------------CCCC--CCCCEEEEEEEEEEECCEEEEEEEEECCCCCCCCHH
T ss_conf             93799999999978899999998098------------9875--678413589999999999999999989886031256


Q ss_pred             HHHHHHCCCCEEEEECCCCCCCCCHHHHH--HHHHH---CCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEEE
Q ss_conf             98774002331452012344332106778--88863---18760233100233356122211012321001110145322
Q gi|254780150|r   88 MITGATQADGAILVCAAEDGPKPQTREHI--LLARQ---IGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSDD  162 (392)
Q Consensus        88 mi~g~~~~D~ailvVda~~G~~~QT~eh~--~l~~~---lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~~  162 (392)
T Consensus        67 ~~~~~~~a~~~ilvydi~~~~Sf~~~~~~~~~i~~~~~~~~~p-iilVgNK~DL~~~r~---Vs~~e~~~~a~~~----~  138 (164)
T cd04145          67 REQYMRTGEGFLLVFSVTDRGSFEEVDKFHTQILRVKDRDEFP-MILVGNKADLEHQRK---VSREEGQELARKL----K  138 (164)
T ss_pred             HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCC-EEEECCCCCHHHHCC---CCHHHHHHHHHHC----C
T ss_conf             7987346787468985673543999999999999861887775-265303457354088---9999999999981----9


Q ss_pred             EECCCCEEEEEE
Q ss_conf             102331146764
Q gi|254780150|r  163 TPIIRGSALCAL  174 (392)
Q Consensus       163 ~pii~~sa~~g~  174 (392)
T Consensus       139 ~~~~E~SAk~~~  150 (164)
T cd04145         139 IPYIETSAKDRL  150 (164)
T ss_pred             CEEEEECCCCCC
T ss_conf             989998548682