HHsearch alignment for GI: 254780150 and conserved domain: cd04145
>cd04145 M_R_Ras_like M-Ras/R-Ras-like subfamily. This subfamily contains R-Ras2/TC21, M-Ras/R-Ras3, and related members of the Ras family. M-Ras is expressed in lympho-hematopoetic cells. It interacts with some of the known Ras effectors, but appears to also have its own effectors. Expression of mutated M-Ras leads to transformation of several types of cell lines, including hematopoietic cells, mammary epithelial cells, and fibroblasts. Overexpression of M-Ras is observed in carcinomas from breast, uterus, thyroid, stomach, colon, kidney, lung, and rectum. In addition, expression of a constitutively active M-Ras mutant in murine bone marrow induces a malignant mast cell leukemia that is distinct from the monocytic leukemia induced by H-Ras. TC21, along with H-Ras, has been shown to regulate the branching morphogenesis of ureteric bud cell branching in mice. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an ali
Probab=98.84 E-value=1.2e-08 Score=72.76 Aligned_cols=142 Identities=20% Similarity=0.231 Sum_probs=84.3
Q ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEE-EEEC--CCEEEEEEECCCCHHHHHH
Q ss_conf 827999990468988789999998764442001312686869862920637899-9821--9908999847873024677
Q gi|254780150|r 11 ESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHV-SYET--DKRFYSHIDCPGHADYVKN 87 (392)
Q Consensus 11 ~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~-~~~~--~~~~i~iiD~PGH~~f~~~ 87 (392)
T Consensus 1 pt~Kiv~lGd~~VGKTsli~r~~~~~------------f~~~--y~~Ti~~~~~k~~~~~~~~~~l~iwDtaG~e~~~~~ 66 (164)
T cd04145 1 PTYKLVVVGGGGVGKSALTIQFIQSY------------FVTD--YDPTIEDSYTKQCEIDGQWAILDILDTAGQEEFSAM 66 (164)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHCCC------------CCCC--CCCCEEEEEEEEEEECCEEEEEEEEECCCCCCCCHH
T ss_conf 93799999999978899999998098------------9875--678413589999999999999999989886031256
Q ss_pred HHHHHHCCCCEEEEECCCCCCCCCHHHHH--HHHHH---CCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEEE
Q ss_conf 98774002331452012344332106778--88863---18760233100233356122211012321001110145322
Q gi|254780150|r 88 MITGATQADGAILVCAAEDGPKPQTREHI--LLARQ---IGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSDD 162 (392)
Q Consensus 88 mi~g~~~~D~ailvVda~~G~~~QT~eh~--~l~~~---lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~~ 162 (392)
T Consensus 67 ~~~~~~~a~~~ilvydi~~~~Sf~~~~~~~~~i~~~~~~~~~p-iilVgNK~DL~~~r~---Vs~~e~~~~a~~~----~ 138 (164)
T cd04145 67 REQYMRTGEGFLLVFSVTDRGSFEEVDKFHTQILRVKDRDEFP-MILVGNKADLEHQRK---VSREEGQELARKL----K 138 (164)
T ss_pred HHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCC-EEEECCCCCHHHHCC---CCHHHHHHHHHHC----C
T ss_conf 7987346787468985673543999999999999861887775-265303457354088---9999999999981----9
Q ss_pred EECCCCEEEEEE
Q ss_conf 102331146764
Q gi|254780150|r 163 TPIIRGSALCAL 174 (392)
Q Consensus 163 ~pii~~sa~~g~ 174 (392)
T Consensus 139 ~~~~E~SAk~~~ 150 (164)
T cd04145 139 IPYIETSAKDRL 150 (164)
T ss_pred CEEEEECCCCCC
T ss_conf 989998548682