HHsearch alignment for GI: 254780150 and conserved domain: cd04146

>cd04146 RERG_RasL11_like RERG/RasL11-like subfamily. RERG (Ras-related and Estrogen- Regulated Growth inhibitor) and Ras-like 11 are members of a novel subfamily of Ras that were identified based on their behavior in breast and prostate tumors, respectively. RERG expression was decreased or lost in a significant fraction of primary human breast tumors that lack estrogen receptor and are correlated with poor clinical prognosis. Elevated RERG expression correlated with favorable patient outcome in a breast tumor subtype that is positive for estrogen receptor expression. In contrast to most Ras proteins, RERG overexpression inhibited the growth of breast tumor cells in vitro and in vivo. RasL11 was found to be ubiquitously expressed in human tissue, but down-regulated in prostate tumors. Both RERG and RasL11 lack the C-terminal CaaX prenylation motif, where a = an aliphatic amino acid and X = any amino acid, and are localized primarily in the cytoplasm. Both are believed to have tu
Probab=98.46  E-value=3.8e-07  Score=63.39  Aligned_cols=149  Identities=18%  Similarity=0.226  Sum_probs=85.1

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEE---EEEEECCCEEEEEEECCCCHHHHHHHH-H
Q ss_conf             999904689887899999987644420013126868698629206378---999821990899984787302467798-7
Q gi|254780150|r   15 LSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATA---HVSYETDKRFYSHIDCPGHADYVKNMI-T   90 (392)
Q Consensus        15 i~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~---~~~~~~~~~~i~iiD~PGH~~f~~~mi-~   90 (392)
T Consensus         2 iv~vGd~~VGKTsli~rf~~~~f~-----~~y~---------~T~~~~~~~~~~v~~~~~~l~iwDtaG~e~~~~~~~~~   67 (165)
T cd04146           2 IAVLGASGVGKSALVVRFLTKRFI-----GEYD---------PNLESLYSRQVTIDGEQVSLEILDTAGQQQADTEQLER   67 (165)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCCC-----CCCC---------CCCCCEEEEEEEECCEEEEEEEEECCCCCCCCHHHHHH
T ss_conf             999998997789999999749899-----8759---------95563057999999999999999289850122012554


Q ss_pred             HHHCCCCEEEEECCCCCCCCCHH----HHHHHHHH--CCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEEE
Q ss_conf             74002331452012344332106----77888863--1876023310023335612221101232100111014532210
Q gi|254780150|r   91 GATQADGAILVCAAEDGPKPQTR----EHILLARQ--IGISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSDDTP  164 (392)
Q Consensus        91 g~~~~D~ailvVda~~G~~~QT~----eh~~l~~~--lgi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~~~p  164 (392)
T Consensus        68 ~~~~a~~~ilvydit~~~Sf~~~~~~~~~i~~~~~~~~~~p-iilVGNK~DL~~~r~---Vs~ee~~~~a~~~----~~~  139 (165)
T cd04146          68 SIRWADGFVLVYSITDRSSFDEISQLKQLIREIKKRDREIP-VILVGNKADLLHYRQ---VSTEEGEKLASEL----GCL  139 (165)
T ss_pred             HCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCE-EEEECCCCCCCCCCC---CCHHHHHHHHHHC----CCE
T ss_conf             30458789999865888999999999999999846699953-998445545210367---7999999999981----998


Q ss_pred             CCCCEEEEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf             233114676411444565212332034431
Q gi|254780150|r  165 IIRGSALCALQGTNKELGEDSIHALMKAVD  194 (392)
Q Consensus       165 ii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~  194 (392)
T Consensus       140 f~E~SAk~~~~---------~V~~~F~~l~  160 (165)
T cd04146         140 FFEVSAAEDYD---------GVHSVFHELC  160 (165)
T ss_pred             EEEEECCCCCC---------CHHHHHHHHH
T ss_conf             99975208782---------6999999999