HHsearch alignment for GI: 254780150 and conserved domain: pfam09439
>pfam09439 SRPRB Signal recognition particle receptor beta subunit. The beta subunit of the signal recognition particle receptor (SRP) is a transmembrane GTPase which anchors the alpha subunit to the endoplasmic reticulum membrane.
Probab=99.01 E-value=1.9e-09 Score=77.68 Aligned_cols=113 Identities=19% Similarity=0.245 Sum_probs=74.0
Q ss_pred CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEE--EEEEEEEECCCEEEEEEECCCCHHHHH
Q ss_conf 388279999904689887899999987644420013126868698629206--378999821990899984787302467
Q gi|254780150|r 9 NKESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITI--ATAHVSYETDKRFYSHIDCPGHADYVK 86 (392)
Q Consensus 9 ~k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi--~~~~~~~~~~~~~i~iiD~PGH~~f~~ 86 (392)
T Consensus 2 ~~p--tvLllGl~~sGKT~Lf~~L~~~~~~------~T---------~tS~~~n~~~~~~~~~~~~~~lvD~PGh~klR~ 64 (181)
T pfam09439 2 SQP--AVIIAGLCDSGKTSLFTLLTTGSVR------KT---------VTSQEPSAAYKYMNNKGNSLTLIDFPGHVKLRY 64 (181)
T ss_pred CCC--EEEEECCCCCCHHHHHHHHHCCCCC------CE---------ECCCCCCCEEEEECCCCCEEEEEECCCCHHHHH
T ss_conf 988--6999868999899999999759948------75---------888678640687516896689998899689999
Q ss_pred HHHH---HHHCCCCEEEEECCCC--CCCCCHHHHHHH-HH---H--CCCCCEEEEECCCCCCCC
Q ss_conf 7987---7400233145201234--433210677888-86---3--187602331002333561
Q gi|254780150|r 87 NMIT---GATQADGAILVCAAED--GPKPQTREHILL-AR---Q--IGISSIVVYMNKVDAVDD 139 (392)
Q Consensus 87 ~mi~---g~~~~D~ailvVda~~--G~~~QT~eh~~l-~~---~--lgi~~iIv~iNKmD~v~~ 139 (392)
T Consensus 65 ~~~~~~~~~~~~~gIVfVVDS~~~~~~l~~~Ae~Ly~iL~~~~~~~~~vP-vLI~cNKqDl~~A 127 (181)
T pfam09439 65 KLLETLKDSSSLRGLVFVVDSTAFPKEVTDTAEFLYDILSITELLKNGID-ILIACNKQEIFTA 127 (181)
T ss_pred HHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCHHHCCCCCC-EEEEEECCCCCCC
T ss_conf 99986430026449999997866566799999999999844543368997-8999737463357