HHsearch alignment for GI: 254780150 and conserved domain: smart00174
>smart00174 RHO Rho (Ras homology) subfamily of Ras-like small GTPases. Members of this subfamily of Ras-like small GTPases include Cdc42 and Rac, as well as Rho isoforms.
Probab=98.59 E-value=1.1e-07 Score=66.63 Aligned_cols=152 Identities=18% Similarity=0.150 Sum_probs=81.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEE---EEEECCCEEEEEEECCCCHHHHHHHH-H
Q ss_conf 9999046898878999999876444200131268686986292063789---99821990899984787302467798-7
Q gi|254780150|r 15 LSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAH---VSYETDKRFYSHIDCPGHADYVKNMI-T 90 (392)
Q Consensus 15 i~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~---~~~~~~~~~i~iiD~PGH~~f~~~mi-~ 90 (392)
T Consensus 1 ivllGd~~VGKTsli~r~~~~------------~f~~~y--~~Ti~~~~~~~~~~~~~~~~l~i~DtaG~e~~~-~l~~~ 65 (174)
T smart00174 1 LVVVGDGAVGKTCLLISYTTN------------AFPEDY--VPTVFENYSADVEVDGKPVELGLWDTAGQEDYD-RLRPL 65 (174)
T ss_pred EEEECCCCCCHHHHHHHHHHC------------CCCCCC--CCCEEEEEEEEEEECCEEEEEEEEECCCCCCCC-CCCHH
T ss_conf 599897897599999999539------------899985--785057899999999999999999489870345-45001
Q ss_pred HHHCCCCEEEEECCCCC-CCCCHHHHH-HHHH--HCCCCCEEEEECCCCCCCCHHHHHHC---------CCCCCEEEEEE
Q ss_conf 74002331452012344-332106778-8886--31876023310023335612221101---------23210011101
Q gi|254780150|r 91 GATQADGAILVCAAEDG-PKPQTREHI-LLAR--QIGISSIVVYMNKVDAVDDDELLDIS---------EYEIRDLLKEH 157 (392)
Q Consensus 91 g~~~~D~ailvVda~~G-~~~QT~eh~-~l~~--~lgi~~iIv~iNKmD~v~~~~~~~~i---------~~~i~~~l~~~ 157 (392)
T Consensus 66 ~~~~a~~~ilvydvt~~~Sf~~~~~~w~~~i~~~~~~~p-iilVgnK~DL~~~~~~~~~~~~~~~~~Vs~~~~~~~a~~~ 144 (174)
T smart00174 66 SYPDTDVFLICFSVDSPASFENVKEKWYPEVKHFCPNTP-IILVGTKLDLREDKSTLRELSKQKQEPVTYEQGEALAKRI 144 (174)
T ss_pred HCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC-EEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
T ss_conf 104886899997589878999999989999998688986-9999875425012333545533146500299999999983
Q ss_pred EEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHC
Q ss_conf 45322102331146764114445652123320344310
Q gi|254780150|r 158 KYSDDTPIIRGSALCALQGTNKELGEDSIHALMKAVDT 195 (392)
Q Consensus 158 ~~~~~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~i~~ 195 (392)
T Consensus 145 ~---~~~y~EtSAk~g~----------nV~e~F~~l~r 169 (174)
T smart00174 145 G---AVKYLECSALTQE----------GVREVFEEAIR 169 (174)
T ss_pred C---CCEEEEECCCCCC----------CHHHHHHHHHH
T ss_conf 9---9789996458894----------98999999999