HHsearch alignment for GI: 254780151 and conserved domain: KOG0571

Probab=97.19  E-value=0.0014  Score=46.24  Aligned_cols=108  Identities=23%  Similarity=0.336  Sum_probs=63.2

Q ss_pred             CCCCEEEEEECCCHHHHHHHHHH----HH----CCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf             63388999960985799999999----88----69849999987047876655557788189999999999980995898
Q gi|254780151|r   18 PKDMRVVVAMSGGVDSSVVAALL----KR----DGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYV   89 (408)
Q Consensus        18 ~k~~kV~va~SGGVDSsvaa~lL----~~----~G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~   89 (408)
T Consensus       223 M~d~p~GvLLSGGLDSSLvAsia~R~lk~~~~~~~~~lhsFaIGle-------------~SPDL~aarkVAd~igt~Hhe  289 (543)
T KOG0571         223 MTDVPFGVLLSGGLDSSLVASIAARELKKAQAARGSKLHSFAIGLE-------------DSPDLLAARKVADFIGTIHHE  289 (543)
T ss_pred             HCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC-------------CCHHHHHHHHHHHHHCCCCEE
T ss_conf             3168615895077318999999999998766412787547885289-------------985378889999874885238


Q ss_pred             CCHHHHHHHHCCC---CCHHHHHCCCCCCCEECCCCEEEHHHHHHHHCCCCCCEECCCC
Q ss_conf             1707886632244---1126787088612000015411058888874016876452253
Q gi|254780151|r   90 FDYEERFRNAVIV---PFASSYAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGH  145 (408)
Q Consensus        90 ~d~~~~f~~~V~~---~~~~~y~~G~TPNPc~~CN~~iKF~~l~~~a~~~g~~~iATGH  145 (408)
T Consensus       290 ~~ft~qegidal~eVI~hLETYDv-----ttIRastpm--yLlsr~Ikk~gvkmvlSGE  341 (543)
T KOG0571         290 HTFTIQEGIDALDEVIYHLETYDV-----TTIRASTPM--YLLSRKIKKLGVKMVLSGE  341 (543)
T ss_pred             EEECHHHHHHHHHHHHEEEECCCC-----CEEECCCCH--HHHHHHHHHCCEEEEEECC
T ss_conf             997588877788877424101344-----158617746--7899999765528998157