HHsearch alignment for GI: 254780151 and conserved domain: PRK00876
>PRK00876 nadE NAD synthetase; Reviewed.
Probab=99.54 E-value=1.7e-13 Score=117.12 Aligned_cols=169 Identities=22% Similarity=0.250 Sum_probs=110.8
Q ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHC-C-CEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHH
Q ss_conf 863388999960985799999999886-9-84999998704787665555778818999999999998099589817078
Q gi|254780151|r 17 NPKDMRVVVAMSGGVDSSVVAALLKRD-G-YDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEE 94 (408)
Q Consensus 17 ~~k~~kV~va~SGGVDSsvaa~lL~~~-G-~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~~ 94 (408)
T Consensus 30 ~~~~kG~VlGlSGGIDSAv~a~Lav~AlG~e~V~gl~MP~-----------~~s~~~s~~~a~~la~~lGi~~~~idI~~ 98 (325)
T PRK00876 30 TLKRRGVVLGLSGGIDSSVTLALCVRALGKDRVLGLLMPE-----------RDSSPDSLRLGRMLAESLGVEYVVEDISP 98 (325)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCC-----------CCCCHHHHHHHHHHHHHCCCCEEEEECHH
T ss_conf 1698679996876888999999999974855169997886-----------56887789999999998199359984489
Q ss_pred HHH--------HHCC-----------------CCCHHH------HH-----------CCCCCCCEE------CCCCEEEH
Q ss_conf 866--------3224-----------------411267------87-----------088612000------01541105
Q gi|254780151|r 95 RFR--------NAVI-----------------VPFASS------YA-----------AGETPLPCV------DCNRTVKF 126 (408)
Q Consensus 95 ~f~--------~~V~-----------------~~~~~~------y~-----------~G~TPNPc~------~CN~~iKF 126 (408)
T Consensus 99 ~l~~~~~y~~~d~~i~~~~p~~~~~~~~~i~~~~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~~~l~~~a~~NiKaR~RM 178 (325)
T PRK00876 99 ALEALGCYERRDEAIRRVVPEYGPGWKSKLVLPNFLEGDLLNVPYLVVQDPGGEVRKKRLPPADYLQIVAATNFKQRTRK 178 (325)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH
T ss_conf 99875431356888875033324200000002311102322310121046421000013550344445553233689999
Q ss_pred HHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCHHHCEEECCCCCCCHHHHHHHHHH
Q ss_conf 88888740168764522531102541267877316885315787873189863020221003342568997898999974
Q gi|254780151|r 127 SDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQSYFLFATTQQQLCDLRFPLGDMKKESVRDLARE 206 (408)
Q Consensus 127 ~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~r~~D~~KDQSYfL~~l~~~~L~~~~FPlg~~~K~eVR~~A~~ 206 (408)
T Consensus 179 ~~lY~~A~~~n~lVlGT~Nks--E~~~G------yfTKyG-DG----------------a~Di~PI~~LyKtQV~~LA~~ 233 (325)
T PRK00876 179 MVEYYHADRLNYAVAGTPNRL--EYDQG------FFVKYG-DG----------------AADLKPIAHLYKTQVYALAEY 233 (325)
T ss_pred HHHHHHHHHCCCEEECCCCHH--HHHHC------CEEEEC-CC----------------CCCCCCCCCCCHHHHHHHHHH
T ss_conf 999999987398776588465--56635------147544-78----------------878451357758999999998
Q ss_pred CCCC--CCCHHHCCCEE
Q ss_conf 1254--35511102301
Q gi|254780151|r 207 MGLD--IADKSDSQDIC 221 (408)
Q Consensus 207 ~gl~--~a~K~eSqgIC 221 (408)
T Consensus 234 LgvPe~Ii~K~PSadLw 250 (325)
T PRK00876 234 LGVPEEIRRRPPTTDTY 250 (325)
T ss_pred CCCCHHHHCCCCCCCCC
T ss_conf 09999993699981335