HHsearch alignment for GI: 254780151 and conserved domain: PRK13820

Probab=99.40  E-value=2.9e-12  Score=108.31  Aligned_cols=165  Identities=28%  Similarity=0.483  Sum_probs=116.0

Q ss_pred             CCCEEEEEECCCHHHHHHHHHHHHC-CC-EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHH
Q ss_conf             3388999960985799999999886-98-499999870478766555577881899999999999809958981707886
Q gi|254780151|r   19 KDMRVVVAMSGGVDSSVVAALLKRD-GY-DVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEERF   96 (408)
Q Consensus        19 k~~kV~va~SGGVDSsvaa~lL~~~-G~-~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~~~f   96 (408)
T Consensus         2 ~~kKVvLAySGGLDTSv~l~wL~e~yg~~eVi~~~~d~Gq------------~~e~~~~~~~kA~~~G~~~~viD~r~ef   69 (395)
T PRK13820          2 MKKKVVLAYSGGLDTSVCIPLLKEKYGYDEVITVAVDVGQ------------PEEEIKEAEEKAKKLGVKHYTIDAKEEF   69 (395)
T ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCC------------CHHHHHHHHHHHHHCCCCEEEEECHHHH
T ss_conf             9872999968984899999999985199869999998999------------7677699999999709949998169999


Q ss_pred             HHHCCCCCHHH---HHCCCCCCCEECCCCEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCC
Q ss_conf             63224411267---870886120000154110588888740168764522531102541267877316885315787873
Q gi|254780151|r   97 RNAVIVPFASS---YAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQ  173 (408)
Q Consensus        97 ~~~V~~~~~~~---y~~G~TPNPc~~CN~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~r~~D~~KDQ  173 (408)
T Consensus        70 ~~~~i~paI~ana~Y-eg-YpL~tslaRpli-a~~~v~~A~~~ga~aiaHG~-----TG---kGNDQvRF--------e-  129 (395)
T PRK13820         70 AKDYIFPAIKANALY-EG-YPLGTALARPLI-AKKIVEVAKKEGASAIAHGC-----TG---KGNDQLRF--------E-  129 (395)
T ss_pred             HHHHHHHHHHCCCCC-CC-CCCCCCHHHHHH-HHHHHHHHHHCCCEEEEECC-----CC---CCCHHHHH--------H-
T ss_conf             999999999708732-67-303241046899-99999999975982983077-----78---98709999--------9-


Q ss_pred             EEEEEEECCHHHCEEECCCCCC--CHHHHHHHHHHCCCCCC---CHHHCCCE
Q ss_conf             1898630202210033425689--97898999974125435---51110230
Q gi|254780151|r  174 SYFLFATTQQQLCDLRFPLGDM--KKESVRDLAREMGLDIA---DKSDSQDI  220 (408)
Q Consensus       174 SYfL~~l~~~~L~~~~FPlg~~--~K~eVR~~A~~~gl~~a---~K~eSqgI  220 (408)
T Consensus       130 ~~~~---ap~-~-~iiaP~R~~~~~R~~~i~ya~~~gI~v~~~~~~~yS~D~  176 (395)
T PRK13820        130 AVFR---ATD-L-DVIAPIRELNLTREWEIEYAKEHGIPVPVGKEKPWSIDE  176 (395)
T ss_pred             HHHH---CCC-C-EEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             9986---789-8-687210453345899999999859988888888852455