HHsearch alignment for GI: 254780151 and conserved domain: TIGR00032

>TIGR00032 argG argininosuccinate synthase; InterPro: IPR001518 Argininosuccinate synthase (6.3.4.5 from EC) (AS) is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate , . In humans, a defect in the AS gene causes citrullinemia, a genetic disease characterised by severe vomiting spells and mental retardation. AS is a homotetrameric enzyme of chains of about 400 amino-acid residues. An arginine seems to be important for the enzyme's catalytic mechanism. The sequences of AS from various prokaryotes, archaebacteria and eukaryotes show significant similarity.; GO: 0004055 argininosuccinate synthase activity, 0005524 ATP binding, 0006526 arginine biosynthetic process.
Probab=99.17  E-value=2.9e-10  Score=93.96  Aligned_cols=171  Identities=26%  Similarity=0.368  Sum_probs=114.6

Q ss_pred             EEEEEECCCHHHHHHHHHHHHC-CC-EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-CCEEECCHHHHHHH
Q ss_conf             8999960985799999999886-98-499999870478766555577881899999999999809-95898170788663
Q gi|254780151|r   22 RVVVAMSGGVDSSVVAALLKRD-GY-DVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTIN-VSHYVFDYEERFRN   98 (408)
Q Consensus        22 kV~va~SGGVDSsvaa~lL~~~-G~-~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~Lg-I~~~~~d~~~~f~~   98 (408)
T Consensus         1 KVvLAySGGLDTSv~l~wL~~kyG~~~Via~~~dvGQP-----------DE~d~~~~~~kA~~~GA~~~~~iDak~eFv~   69 (420)
T TIGR00032         1 KVVLAYSGGLDTSVCLKWLEEKYGYEEVIAVTADVGQP-----------DEEDIDAIEEKALKYGAEKHYTIDAKEEFVK   69 (420)
T ss_pred             CEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECCCC-----------CHHHHHHHHHHHHHHCCCEEEEEECHHHHHH
T ss_conf             96888607025999999988652898607999756799-----------9888888999988736710257723688999


Q ss_pred             HCCCCCHHHHH--CCC----CCCCEECCCCEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEE-EEECCCCCC
Q ss_conf             22441126787--088----61200001541105888887401687645225311025412678773168-853157878
Q gi|254780151|r   99 AVIVPFASSYA--AGE----TPLPCVDCNRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRI-MCRPMDLER  171 (408)
Q Consensus        99 ~V~~~~~~~y~--~G~----TPNPc~~CN~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~-L~r~~D~~K  171 (408)
T Consensus        70 dy~f~aiqanA~Ye~~GG~~Y~L~TaLaRPlI-A~~lVe~Ak~~Ga~AvaHGC-----TGKGND-Q~RFe~~~-------  135 (420)
T TIGR00032        70 DYLFAAIQANAVYEGTGGLVYPLSTALARPLI-AKKLVEVAKKEGAEAVAHGC-----TGKGND-QVRFERSI-------  135 (420)
T ss_pred             HHHHHHHHCCCEECCCCCEECCCCCCCHHHHH-HHHHHHHHHHCCCEEEECCC-----CCCCCC-HHHHHHHH-------
T ss_conf             99888765066031787410347661145799-99999998466954987076-----877741-35765888-------


Q ss_pred             CCEEEEEEECCHHHCEEECCCCCC--C-----HHHHHHHHHHCCCCCC---CHHHCCCEEECCC
Q ss_conf             731898630202210033425689--9-----7898999974125435---5111023011127
Q gi|254780151|r  172 DQSYFLFATTQQQLCDLRFPLGDM--K-----KESVRDLAREMGLDIA---DKSDSQDICFVQQ  225 (408)
Q Consensus       172 DQSYfL~~l~~~~L~~~~FPlg~~--~-----K~eVR~~A~~~gl~~a---~K~eSqgICFi~~  225 (408)
T Consensus       136 -------~~~~p~L-kviaP~R~~~~~e~lgGR~e~~eYa~~~Gip~p~~~~K~YSiD~Nl~gr  191 (420)
T TIGR00032       136 -------RALNPDL-KVIAPWRDLNLTEELGGREEEIEYAAQKGIPVPMTKEKPYSIDENLWGR  191 (420)
T ss_pred             -------HHHCCCC-EEECCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             -------7526898-5874734646776405948899999966888765467777623667755