HHsearch alignment for GI: 254780151 and conserved domain: TIGR02823
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family; InterPro: IPR014188 This entry represents a subfamily of the alcohol dehydrogenase, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This entry includes YhdH from Escherichia coli and YhfP from Bacillus subtilis both of which bind NADPH or NAD, but not zinc. Both proteins have been studied crystallographically for insight into function. .
Probab=91.17 E-value=0.45 Score=28.23 Aligned_cols=170 Identities=24% Similarity=0.265 Sum_probs=86.6
Q ss_pred CCCCCCCCCCCCCEEEE-EECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH-HHHHHCCCC
Q ss_conf 44346788863388999-9609857999999998869849999987047876655557788189999999-999980995
Q gi|254780151|r 9 LNSLDLDKNPKDMRVVV-AMSGGVDSSVVAALLKRDGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDAR-RVCDTINVS 86 (408)
Q Consensus 9 ~~~~~~~~~~k~~kV~v-a~SGGVDSsvaa~lL~~~G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~-~va~~LgI~ 86 (408)
T Consensus 139 Le~~Gl~~P-~~GpVlVTGAtGGVGS-~Av~~L~~lGY~V~A~tGk~---------------~-----~~~~yL~~LG-A 195 (330)
T TIGR02823 139 LERNGLLTP-EDGPVLVTGATGGVGS-LAVAILSKLGYEVVASTGKA---------------E-----EEVEYLKELG-A 195 (330)
T ss_pred HHHCCCCCC-CCCCEEEECCCCCHHH-HHHHHHHHCCCEEEEEECCH---------------H-----HHHHHHHHCC-C
T ss_conf 997268888-8887887067787789-99999983797699973783---------------7-----7889998658-1
Q ss_pred EEECCHHHHHHHH-CCCCCHHHHHCCCCCCCEECCCCEEEHHHHHHH-HCCC---CC---CEECCCCCCCEEEECCCCCC
Q ss_conf 8981707886632-244112678708861200001541105888887-4016---87---64522531102541267877
Q gi|254780151|r 87 HYVFDYEERFRNA-VIVPFASSYAAGETPLPCVDCNRTVKFSDLLSV-TRQL---GA---DVLATGHYIRSRLYVGDDGK 158 (408)
Q Consensus 87 ~~~~d~~~~f~~~-V~~~~~~~y~~G~TPNPc~~CN~~iKF~~l~~~-a~~~---g~---~~iATGHYar~~~~~~~~~~ 158 (408)
T Consensus 196 ~evi~-R~~l~~~a~~kPL~k~~WAG-----AvDt---VG-G~~La~~l~~~~ygG~VA~cGlagG~----~----L~tT 257 (330)
T TIGR02823 196 SEVID-REELSEDAPGKPLEKERWAG-----AVDT---VG-GKTLANVLAQLKYGGAVAACGLAGGA----D----LPTT 257 (330)
T ss_pred CCCCC-HHHCCCCCCCCCCCCCCCCC-----EEEC---CC-HHHHHHHHHHHCCCCEEEEEECCCCC----C----CCCE
T ss_conf 10577-11227687888631222221-----5746---87-57999999840689789999426798----6----3501
Q ss_pred CEEEEEECCCCCCCCEEEEEEECCHHHCEEECCCCCCCHHHH-HHHHHHCCCCCCCHHHCCCEEECCCCCCHHHHHHCCC
Q ss_conf 316885315787873189863020221003342568997898-9999741254355111023011127751034553076
Q gi|254780151|r 159 RRRIMCRPMDLERDQSYFLFATTQQQLCDLRFPLGDMKKESV-RDLAREMGLDIADKSDSQDICFVQQGKYFDVVKRINA 237 (408)
Q Consensus 159 ~~~~L~r~~D~~KDQSYfL~~l~~~~L~~~~FPlg~~~K~eV-R~~A~~~gl~~a~K~eSqgICFi~~~~~~~Fl~~~~~ 237 (408)
T Consensus 258 V~PFILRGV~--------LlGIDSV~~p~~-------~R~~~W~RLA~dl~~~~L~~~~~~ei~L---~elp~~~~~~l~ 319 (330)
T TIGR02823 258 VLPFILRGVS--------LLGIDSVYCPMA-------LREAAWQRLATDLKPRNLESLTTQEITL---EELPEAAEQILA 319 (330)
T ss_pred ECCHHHCCCE--------EEEECHHCCCHH-------HHHHHHHHHHHHCCHHHHHHHHCCCCCH---HHHHHHHHHHHC
T ss_conf 2550432853--------888530018878-------9999999887415977888784200157---768999999973