HHsearch alignment for GI: 254780151 and conserved domain: pfam06508
>pfam06508 ExsB ExsB. This family includes putative transcriptional regulators from Bacteria and Archaea.
Probab=99.42 E-value=1.4e-12 Score=110.65 Aligned_cols=113 Identities=24% Similarity=0.337 Sum_probs=85.6
Q ss_pred EEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHH---H
Q ss_conf 8999960985799999999886984999998704787665555778818999999999998099589817078866---3
Q gi|254780151|r 22 RVVVAMSGGVDSSVVAALLKRDGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEERFR---N 98 (408)
Q Consensus 22 kV~va~SGGVDSsvaa~lL~~~G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~~~f~---~ 98 (408)
T Consensus 1 Kavvl~SGG~DSt~~l~~a~~~~~~v~ait~dYG----------Q-~~~~Ei~~A~~ia~~l~i~h~vidl~~l~~~~~s 69 (137)
T pfam06508 1 KAVVLLSGGLDSTTCLAWAKKEGYEVYALTFDYG----------Q-RHSKELECAKKIAKALGVEHKIVDLDFLKQIGGS 69 (137)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCC----------C-CHHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCC
T ss_conf 9899917878999999999986996899981478----------8-7399999999999982997503033024441655
Q ss_pred HCC----CCCHHHHHCCCCCCCEECCCCEEEHHHHHHHHCCCCCCEECCCC
Q ss_conf 224----41126787088612000015411058888874016876452253
Q gi|254780151|r 99 AVI----VPFASSYAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGH 145 (408)
Q Consensus 99 ~V~----~~~~~~y~~G~TPNPc~~CN~~iKF~~l~~~a~~~g~~~iATGH 145 (408)
T Consensus 70 aL~~~~~~vp~~~~~~~~~~~t~VP~RN~iflsiA~a~A~~~g~~~I~~G~ 120 (137)
T pfam06508 70 ALTDDSIEVPDSELESEEIPNTYVPGRNLIFLSIAASYAEAIGANDIFIGV 120 (137)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 223688555665434567877656365499999999999986999799956