HHsearch results for GI: 254780151 and protein with PDBid: 1kor_A
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=99.36 E-value=9e-13 Score=110.39 Aligned_cols=162 Identities=22% Similarity=0.336 Sum_probs=111.3
Q ss_pred CEEEEEECCCHHHHHHHHHHHHC-CCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-CEEECCHHHHHHH
Q ss_conf 88999960985799999999886-984999998704787665555778818999999999998099-5898170788663
Q gi|254780151|r 21 MRVVVAMSGGVDSSVVAALLKRD-GYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINV-SHYVFDYEERFRN 98 (408)
Q Consensus 21 ~kV~va~SGGVDSsvaa~lL~~~-G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI-~~~~~d~~~~f~~ 98 (408)
|||++|.|||.|+|+++..|+++ |+||++++..+.. .+|++.+++-|..+|. +++++|++++|.+
T Consensus 1 mKVvLAySGGLDTSv~l~wL~e~~~~eVi~~~~d~Gq-------------~~d~~~i~~kA~~~GA~~~~v~D~r~ef~~ 67 (400)
T 1kor_A 1 MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQ-------------GEEVEEAREKALRTGASKAIALDLKEEFVR 67 (400)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHTCEEEEEEEESSC-------------SSCHHHHHHHHHHHTCSEEEEEECHHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCC-------------HHHHHHHHHHHHHHCCCEEEEECCHHHHHH
T ss_conf 9699994898179999999974059889999970886-------------676699999999849988999757999999
Q ss_pred HCCCCCHHHHH--CCCCCCCEECCCCEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEE---EEECCCCCCCC
Q ss_conf 22441126787--08861200001541105888887401687645225311025412678773168---85315787873
Q gi|254780151|r 99 AVIVPFASSYA--AGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRI---MCRPMDLERDQ 173 (408)
Q Consensus 99 ~V~~~~~~~y~--~G~TPNPc~~CN~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~---L~r~~D~~KDQ 173 (408)
+.+-|++.+-. .|.-|.-+..--+.| =..+.+.|++.|+++||.|-=. .++.... -.++.++.
T Consensus 68 ~~i~p~i~ana~Ye~~Y~l~tslaRpli-a~~~v~~A~~~ga~~iaHG~TG--------kGNDQvRFe~~~~al~P~--- 135 (400)
T 1kor_A 68 DFVFPMMRAGAVYEGYYLLGTSIARPLI-AKHLVRIAEEEGAEAIAHGATG--------KGNDQVRFELTAYALKPD--- 135 (400)
T ss_dssp HTHHHHHHTTCCBTTTBCCTTTTHHHHH-HHHHHHHHHHHTCSEEECCCCT--------TSSHHHHHHHHHHHHCTT---
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCHHHHH-HHHHHHHHHHCCCEEEECCCCC--------CCCCHHHHHHHHHHHCCC---
T ss_conf 9999999738655787623454106479-9999999854497699437775--------787236688899975999---
Q ss_pred EEEEEEECCHHHCEEECCCCCC---CHHHHHHHHHHCCCCCCC---HHHCCC
Q ss_conf 1898630202210033425689---978989999741254355---111023
Q gi|254780151|r 174 SYFLFATTQQQLCDLRFPLGDM---KKESVRDLAREMGLDIAD---KSDSQD 219 (408)
Q Consensus 174 SYfL~~l~~~~L~~~~FPlg~~---~K~eVR~~A~~~gl~~a~---K~eSqg 219 (408)
+ +++=|..++ +.++--+.|++.|+|+.. |+=|+|
T Consensus 136 -----------l-~iiaPwRd~~~~sR~~~i~ya~~~gIpv~~~~~~~yS~D 175 (400)
T 1kor_A 136 -----------I-KVIAPWREWSFQGRKEMIAYAEAHGIPVPVTQEKPYSMD 175 (400)
T ss_dssp -----------C-EEECGGGTCCCCSHHHHHHHHHHTTCCCC-----CCEEE
T ss_pred -----------C-EEECCCHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf -----------7-485010102536679999999984999865678887546