HHsearch results for GI: 254780151 and protein with PDBid: 1kqp_A
>1kqp_A NAD+ synthase;, NH(3)-dependent NAD(+) synthetase; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=99.68 E-value=2.3e-17 Score=143.28 Aligned_cols=160 Identities=23% Similarity=0.250 Sum_probs=111.7
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHC--------C-CEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE-
Q ss_conf 3388999960985799999999886--------9-84999998704787665555778818999999999998099589-
Q gi|254780151|r 19 KDMRVVVAMSGGVDSSVVAALLKRD--------G-YDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHY- 88 (408)
Q Consensus 19 k~~kV~va~SGGVDSsvaa~lL~~~--------G-~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~- 88 (408)
+..+|+|||||||||||+|+|++++ | ..|.++.|-. .+.++.++|+.+|+.+++.+.
T Consensus 37 g~~~vVvGlSGGIDSav~A~L~~~a~~~~~~~~g~~~v~~v~mp~-------------~~~~~~~da~~~~~~~~~~~~~ 103 (271)
T 1kqp_A 37 GAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPH-------------GTQQDEDDAQLALKFIKPDKSW 103 (271)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCS-------------SSCTTHHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------CCCCCHHHHHHHHHHHCCCCEE
T ss_conf 898199979888889999999999999887606885799984687-------------6765699999999860766516
Q ss_pred ECCHHHHHHHHCCCCCHHHHHCCCCCCCEECC----CCEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEE
Q ss_conf 81707886632244112678708861200001----54110588888740168764522531102541267877316885
Q gi|254780151|r 89 VFDYEERFRNAVIVPFASSYAAGETPLPCVDC----NRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMC 164 (408)
Q Consensus 89 ~~d~~~~f~~~V~~~~~~~y~~G~TPNPc~~C----N~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~ 164 (408)
.+++.+. ++.|.+.+.....++++-.| ..++++..|+..|.+.|+-.++|||..-. ..| + ..
T Consensus 104 ~i~I~~~-----~~~~~~~~~~~~~~~~~~~~~~NiqaRiR~~~Ly~~An~~g~lvlgTgNksE~--~~G------y-~T 169 (271)
T 1kqp_A 104 KFDIKST-----VSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQYAIGGQEGLLVLGTDHAAEA--VTG------F-FT 169 (271)
T ss_dssp ECCCHHH-----HHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCCHHHH--TTT------C-SC
T ss_pred EECCHHH-----HHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCCCC--EEE------E-EE
T ss_conf 8640888-----86766531121023432144525421445589987664369669838971020--100------1-67
Q ss_pred ECCCCCCCCEEEEEEECCHHHCEEECCCCCCCHHHHHHHHHHCCCC--CCCHHHCCCEE
Q ss_conf 3157878731898630202210033425689978989999741254--35511102301
Q gi|254780151|r 165 RPMDLERDQSYFLFATTQQQLCDLRFPLGDMKKESVRDLAREMGLD--IADKSDSQDIC 221 (408)
Q Consensus 165 r~~D~~KDQSYfL~~l~~~~L~~~~FPlg~~~K~eVR~~A~~~gl~--~a~K~eSqgIC 221 (408)
..-|.. .-++|||+++|.|||++|+.+|+| +-+|+=|-|+.
T Consensus 170 kyGD~~----------------~di~Pi~~L~K~eV~~la~~lgiP~~ii~k~PsaeL~ 212 (271)
T 1kqp_A 170 KYGDGG----------------ADLLPLTGLTKRQGRTLLKELGAPERLYLKEPTADLL 212 (271)
T ss_dssp TTTTTC----------------CSBCTTTTCCHHHHHHHHHHTTCCTHHHHSCCBCCCC
T ss_pred ECCCCC----------------CCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCHHCC
T ss_conf 758787----------------4513233577899999999839987770589981012