HHsearch results for GI: 254780151 and protein with PDBid: 1xng_A
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=99.87 E-value=5.8e-23 Score=183.30 Aligned_cols=162 Identities=20% Similarity=0.263 Sum_probs=120.5
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHCCC-EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHH
Q ss_conf 338899996098579999999988698-4999998704787665555778818999999999998099589817078866
Q gi|254780151|r 19 KDMRVVVAMSGGVDSSVVAALLKRDGY-DVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEERFR 97 (408)
Q Consensus 19 k~~kV~va~SGGVDSsvaa~lL~~~G~-~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~~~f~ 97 (408)
..++|+|||||||||||+|+|++++|. +|+|++|.. .++++++..+|+.+|+.|||++..++....+
T Consensus 24 g~k~vvvglSGGVDSav~A~La~~a~~~~v~~v~mp~-----------~~~~~~~~~~A~~~a~~Lgi~~~~i~~~~~~- 91 (268)
T 1xng_A 24 GFKKVVYGLSGGLDSAVVGVLCQKVFKENAHALLMPS-----------SVSMPENKTDALNLCEKFSIPYTEYSIAPYD- 91 (268)
T ss_dssp TCCCEEEECCSSHHHHHHHHHHHHHHGGGEEEEECCC-----------SSSCHHHHHHHHHHHHHHTCCEEECCCHHHH-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEECCC-----------HHCCHHHHHHHHHHHHHHHHCCCCCCHHHHH-
T ss_conf 9981999786889999999999985032267871350-----------1057155799999999833023013279999-
Q ss_pred HHCCCCCHHHHHCCCCCCCEECCCCEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEE
Q ss_conf 32244112678708861200001541105888887401687645225311025412678773168853157878731898
Q gi|254780151|r 98 NAVIVPFASSYAAGETPLPCVDCNRTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQSYFL 177 (408)
Q Consensus 98 ~~V~~~~~~~y~~G~TPNPc~~CN~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~r~~D~~KDQSYfL 177 (408)
.++..++.........|-+ .++++..++..|.+.|...++||++ +++++.
T Consensus 92 -~~~~~~~~~~~~~~~~n~~----aR~r~~~ly~~a~~~~~~v~gt~n~-------------------------~e~~~g 141 (268)
T 1xng_A 92 -AIFSSHFKDASLTRKGNFC----ARLRMAFLYDYSLKSDSLVIGTSNK-------------------------SERMLG 141 (268)
T ss_dssp -HHHHHHCTTCCHHHHHHHH----HHHHHHHHHHHHHHHTCEEBCCCCH-------------------------HHHHHT
T ss_pred -HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHCCCCCCCCCC-------------------------CCEEEC
T ss_conf -8888750124567877889----9987888888899709824688775-------------------------431035
Q ss_pred EEECCHHHCEEECCCCCCCHHHHHHHHHHCCCC--CCCHHHCCCEEE
Q ss_conf 630202210033425689978989999741254--355111023011
Q gi|254780151|r 178 FATTQQQLCDLRFPLGDMKKESVRDLAREMGLD--IADKSDSQDICF 222 (408)
Q Consensus 178 ~~l~~~~L~~~~FPlg~~~K~eVR~~A~~~gl~--~a~K~eSqgICF 222 (408)
+......+...++||++++|+|||++|+.+|+| +.+|+.|.|+.-
T Consensus 142 ~~t~~gd~~~~~~Pl~~L~K~eVr~LAr~lglP~~ii~k~Ps~~l~~ 188 (268)
T 1xng_A 142 YGTLFGDLACAINPIGELFKTEVYELARRLNIPKKILNKPPSADLFV 188 (268)
T ss_dssp CSCTTTTTCCSEETTTTSCHHHHHHHHHHTTCCHHHHTSCCCCCSST
T ss_pred CCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCCCC
T ss_conf 67655542668411469709999999998099699807999989788