HHsearch results for GI: 254780151 and protein with PDBid: 2dpl_A
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii OT3} PDB: 2z0c_A 3a4i_A
Probab=99.90 E-value=1.7e-24 Score=194.31 Aligned_cols=227 Identities=21% Similarity=0.208 Sum_probs=149.9
Q ss_pred CCCCEEEEEECCCHHHHHHHHHHHHC-CCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHH
Q ss_conf 63388999960985799999999886-98499999870478766555577881899999999999809958981707886
Q gi|254780151|r 18 PKDMRVVVAMSGGVDSSVVAALLKRD-GYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEERF 96 (408)
Q Consensus 18 ~k~~kV~va~SGGVDSsvaa~lL~~~-G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~~~f 96 (408)
.++.||+|||||||||||+|+|++++ |.+|+|++|.+ +..+..++.+.++..++++||+++++|+.+.|
T Consensus 18 vg~~kVvvalSGGVDSsV~A~L~~kAlGd~v~aV~~d~----------g~~r~~E~~~~~~~~~~~~gi~~~~vd~~~~~ 87 (308)
T 2dpl_A 18 VGDSKAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNT----------GFLRKGEPEFVVKTFRDEFGMNLHYVDAQDRF 87 (308)
T ss_dssp HTTSCEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEEC----------SCCCTTHHHHHHHHHTTTTCCEEEEEECHHHH
T ss_pred HCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECC----------CCCCCCHHHHHHHHHHHCCCCCCEEEECHHHH
T ss_conf 48998999904889999999999997388689999478----------87881279999986640258650799678987
Q ss_pred HHHCCCCCHHHHHCCCCCCC---EECCCCEEEHHHHHHHHCCCCCCEECCCCC-CCEEEECCCCCCCEEEEEECCCCCCC
Q ss_conf 63224411267870886120---000154110588888740168764522531-10254126787731688531578787
Q gi|254780151|r 97 RNAVIVPFASSYAAGETPLP---CVDCNRTVKFSDLLSVTRQLGADVLATGHY-IRSRLYVGDDGKRRRIMCRPMDLERD 172 (408)
Q Consensus 97 ~~~V~~~~~~~y~~G~TPNP---c~~CN~~iKF~~l~~~a~~~g~~~iATGHY-ar~~~~~~~~~~~~~~L~r~~D~~KD 172 (408)
... .+|. .|| |..|.+ +.+..|.+.|+++|++++||||. .....+ +..+.....
T Consensus 88 ~~~---------l~gv-~~pe~k~~~~~~-~~~~~l~~~A~~~g~~~l~~Gt~~~D~~E~-------~~gikt~~~---- 145 (308)
T 2dpl_A 88 FSA---------LKGV-TDPEEKRKIIGR-VFIEVFEEVAKKIGAEYLIQGTIAPDWIES-------QGKIKSHHN---- 145 (308)
T ss_dssp HHH---------TTTC-CCHHHHHHHHHH-HHHHHHHHHHHHHTCSEEECCCCCC-------------------------
T ss_pred HHH---------HCCC-CCHHHHHHHHHH-HHHHHHHHHHHHCCCCEECCCCCCCCHHHH-------CCCEEEEEC----
T ss_conf 776---------5288-995897627608-999999999998399585134020425541-------353267615----
Q ss_pred CEEEEEEECCHHHCEEECCCCCCCHHHHHHHHHHCCCC--CCCHHHCCCEEECCCCCCHHHHH-HCCCCCCCCCC-EECC
Q ss_conf 31898630202210033425689978989999741254--35511102301112775103455-30766434671-1037
Q gi|254780151|r 173 QSYFLFATTQQQLCDLRFPLGDMKKESVRDLAREMGLD--IADKSDSQDICFVQQGKYFDVVK-RINAGIALEGD-IVHL 248 (408)
Q Consensus 173 QSYfL~~l~~~~L~~~~FPlg~~~K~eVR~~A~~~gl~--~a~K~eSqgICFi~~~~~~~Fl~-~~~~~~~~~G~-ivd~ 248 (408)
...+++....+++.||++++|+|||++|+++||| +.+|+-|-|...- -.+...+. +.+.. .+..+ |+..
T Consensus 146 ----~Ggl~~~~~~~~iePL~~L~K~EVR~la~~LGlP~~i~~K~P~pgpgl~--i~~~~~it~e~l~~-v~~a~~i~~~ 218 (308)
T 2dpl_A 146 ----VGGLPEKLNLKLIEPLRDLYKDEVRELAKFLGLPEKIYNRMPFPGPGLA--VRVIGEVTPEKIRI-VREANAIVEE 218 (308)
T ss_dssp -----------CCCEEECTTTTCCHHHHHHHHHHTTCCHHHHTCCCCCTTGGG--GGBSSSCCHHHHHH-HHHHHHHHHH
T ss_pred ----CCCCCHHHCCCHHHHHHHHCHHHHHHHHHHHCCCHHHHCCCCCCCCCCC--CCCCCCCCHHHHHH-HHHHHHHHHH
T ss_conf ----7886265354412378874569999999980999899288999850124--54586333888874-7999999999
Q ss_pred CCCEEEEECCCEEEEECCCCCCCCCCCCCCE--EEEC
Q ss_conf 7432233578315310233433565778613--7631
Q gi|254780151|r 249 NGQILGRHNGIINYTIGQRRGLGVAMGEPLF--VVYL 283 (408)
Q Consensus 249 ~G~viG~H~G~~~yTIGQRkGL~i~~~eP~Y--Vv~i 283 (408)
.-+.-|.+..-.+.++.+.|..|+-+..+-| |+.+
T Consensus 219 ~~~~~~~~~~q~~~~l~~~~~vgv~gd~r~y~~~~~~ 255 (308)
T 2dpl_A 219 EVERAGLRPWQAFAVLLGVKTVGVQGDIRAYKETIAV 255 (308)
T ss_dssp HHHHTTCCCSEEEEEECCCCEEEESSSSEEEEEEEEE
T ss_pred HHHHCCCCCCEEEEEEECCCCCEECCCCCCCCCEEEE
T ss_conf 9998188731004899676162158995554864899