HHsearch results for GI: 254780151 and protein with PDBid: 2e18_A
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Pyrococcus horikoshii OT3}
Probab=99.71 E-value=6e-19 Score=154.57 Aligned_cols=163 Identities=23% Similarity=0.285 Sum_probs=114.8
Q ss_pred CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHC-C-CEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 46788863388999960985799999999886-9-849999987047876655557788189999999999980995898
Q gi|254780151|r 12 LDLDKNPKDMRVVVAMSGGVDSSVVAALLKRD-G-YDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYV 89 (408)
Q Consensus 12 ~~~~~~~k~~kV~va~SGGVDSsvaa~lL~~~-G-~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~ 89 (408)
.++-+.....+|+|||||||||||+|+|++++ | ..|+|++|..+ +.++.++|+.+|+.|||+++.
T Consensus 14 ~d~~~~~g~~~vvvglSGGVDSav~A~La~~AlG~~~v~~v~~~~~-------------~~~~~~~A~~~~~~lgi~~~~ 80 (257)
T 2e18_A 14 LEFIREKGNNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYF-------------ENKDVEDAKLVAEKLGIGYKV 80 (257)
T ss_dssp HHHHHHHCTTCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCSS-------------CSTHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCC-------------CHHHHHHHHHHHHHHCCCCCE
T ss_conf 9999983999789968877999999999998638641688515765-------------303479999999863787302
Q ss_pred CCHHHHHHHHCCCCCHHHHHCCCCCCCEECCC----CEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEEE
Q ss_conf 17078866322441126787088612000015----41105888887401687645225311025412678773168853
Q gi|254780151|r 90 FDYEERFRNAVIVPFASSYAAGETPLPCVDCN----RTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCR 165 (408)
Q Consensus 90 ~d~~~~f~~~V~~~~~~~y~~G~TPNPc~~CN----~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~r 165 (408)
+++.+.|... ++ ...++.+-.|- .+++...|...|...|+-.+.||++..... + + ...
T Consensus 81 i~i~~~~~~~-----~~----~l~~~~~~~~~~ni~ar~r~~~l~~~a~~~~~~vl~t~n~se~~~--g------~-~t~ 142 (257)
T 2e18_A 81 INIKPIVDSF-----VE----NLELNLDRKGLGNIMSRTRMIMLYAHANSLGRIVLGTSNRSEFLT--G------Y-FTK 142 (257)
T ss_dssp CCCHHHHHHH-----HH----HHCSCCCHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCHHHHHH--T------C-SCT
T ss_pred EECCHHHHHH-----HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHE--E------C-CCC
T ss_conf 4304789999-----99----864556677788789888689999998863977944787342320--1------3-555
Q ss_pred CCCCCCCCEEEEEEECCHHHCEEECCCCCCCHHHHHHHHHHCCCC--CCCHHHCCCEE
Q ss_conf 157878731898630202210033425689978989999741254--35511102301
Q gi|254780151|r 166 PMDLERDQSYFLFATTQQQLCDLRFPLGDMKKESVRDLAREMGLD--IADKSDSQDIC 221 (408)
Q Consensus 166 ~~D~~KDQSYfL~~l~~~~L~~~~FPlg~~~K~eVR~~A~~~gl~--~a~K~eSqgIC 221 (408)
.-|.. ..+.||++++|+|||++|+++|+| +.+|+=|-|++
T Consensus 143 ~gd~~----------------~~~~Pl~dL~K~eVr~La~~Lglp~~ii~r~Psp~L~ 184 (257)
T 2e18_A 143 WGDGA----------------SDYAPIINLYKTEVWEIAKRIGVPERIVKKKPSAGLW 184 (257)
T ss_dssp TSTTC----------------SSBCTTTTSCHHHHHHHHHHHTCCHHHHHSCCCCCSS
T ss_pred CCCCC----------------CCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCC
T ss_conf 67545----------------7765456884999999999849996886069996556