HHsearch results for GI: 254780151 and protein with PDBid: 2ywb_A
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway; 2.10A {Thermus thermophilus HB8} PDB: 2ywc_A*
Probab=99.72 E-value=6.8e-17 Score=139.89 Aligned_cols=163 Identities=26% Similarity=0.306 Sum_probs=111.8
Q ss_pred CCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHH
Q ss_conf 88863388999960985799999999886984999998704787665555778818999999999998099589817078
Q gi|254780151|r 15 DKNPKDMRVVVAMSGGVDSSVVAALLKRDGYDVIGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEE 94 (408)
Q Consensus 15 ~~~~k~~kV~va~SGGVDSsvaa~lL~~~G~~V~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~~ 94 (408)
++...+.||++|+||||||||+|+||+++|-+.+++|+.+ +.... .+.+.+.+..+++|+++.++|.++
T Consensus 204 r~~vg~~~Vi~~lSGGVDSsV~A~Ll~kA~~~~~cvfVD~---GllRk--------~E~~~v~~~~~~~~~~~~~vda~~ 272 (503)
T 2ywb_A 204 RERAGKDRVLLAVSGGVDSSTLALLLAKAGVDHLAVFVDH---GLLRL--------GEREEVEGALRALGVNLLVVDAKE 272 (503)
T ss_dssp HHHHTTSEEEEEECSSHHHHHHHHHHHHHTCEEEEEEEEC---SCSCT--------THHHHHHHHHHHTTCCEEEEECHH
T ss_pred HHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHEEEEEECC---CCCCC--------CHHHHHHHHHHHCCCCEEEEECHH
T ss_conf 9984886179983487065999999999765308999468---76657--------609999999987498589996048
Q ss_pred HHHHHCCCCCHHHHHCCCCCCCEEC----CCCEEEHHHHHHHHCCCC-CCEECCCC-CCCEEEECCCCCCCEEEEEECCC
Q ss_conf 8663224411267870886120000----154110588888740168-76452253-11025412678773168853157
Q gi|254780151|r 95 RFRNAVIVPFASSYAAGETPLPCVD----CNRTVKFSDLLSVTRQLG-ADVLATGH-YIRSRLYVGDDGKRRRIMCRPMD 168 (408)
Q Consensus 95 ~f~~~V~~~~~~~y~~G~TPNPc~~----CN~~iKF~~l~~~a~~~g-~~~iATGH-Yar~~~~~~~~~~~~~~L~r~~D 168 (408)
+|-+. .+|.| +|--- =+.+ +..|-+.|+++| ++|+|.|. |..+.++.+..+ ...+...+.
T Consensus 273 ~Fl~~---------L~gv~-dPE~KRkiIG~~F--i~vfe~~~~~~~~~~~L~QGTlypDvIES~~~~~--~~~iKsHHN 338 (503)
T 2ywb_A 273 RFLKA---------LKGVE-DPEEKRKIIGREF--VAAFSQVARERGPFRFLAQGTLYPDVIESAGGHG--AAKIKSHHN 338 (503)
T ss_dssp HHHHH---------HTTCC-CHHHHHHHHHHHH--HHHHHHHHHHHCCCSEEECCCCHHHHHC-----------------
T ss_pred HHHHH---------HCCCC-CHHHHHHHCCHHH--HHHHHHHHHHCCCCEEEECCCCCCCEECCCCCCC--CCCCCCCCC
T ss_conf 77786---------25987-9589743203899--9999999875489679952761365340367777--777603156
Q ss_pred CCCCCEEEEEEECCHHHCEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf 878731898630202210033425689978989999741254
Q gi|254780151|r 169 LERDQSYFLFATTQQQLCDLRFPLGDMKKESVRDLAREMGLD 210 (408)
Q Consensus 169 ~~KDQSYfL~~l~~~~L~~~~FPlg~~~K~eVR~~A~~~gl~ 210 (408)
--.|+++.--+++-||-++.|+|||++++++|||
T Consensus 339 --------vgglp~~~~~klvEPl~~lfKdEVR~lg~~Lglp 372 (503)
T 2ywb_A 339 --------VGGLPEDLEFELLEPFRLLFKDEVRELALLLGLP 372 (503)
T ss_dssp ----------CCCSSCCCEEECTTTTCCHHHHHHHHHHTTCC
T ss_pred --------CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf --------8864466230045689998578999999986898