HHsearch results for GI: 254780151 and protein with PDBid: 3ilv_A
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=98.59 E-value=1.6e-09 Score=87.19 Aligned_cols=169 Identities=18% Similarity=0.189 Sum_probs=99.7
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHC-C-----------------------------------CEE
Q ss_conf 6555444346788863388999960985799999999886-9-----------------------------------849
Q gi|254780151|r 4 SEATRLNSLDLDKNPKDMRVVVAMSGGVDSSVVAALLKRD-G-----------------------------------YDV 47 (408)
Q Consensus 4 ~~~~~~~~~~~~~~~k~~kV~va~SGGVDSsvaa~lL~~~-G-----------------------------------~~V 47 (408)
++|+.+..-++-++.+..++++++|||+||+++|.|..++ + -+|
T Consensus 287 ~~al~lgl~Dy~~k~~~~~~vlglSGGiDSal~a~la~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 366 (634)
T 3ilv_A 287 WEATSLGLFDYMRKSRSKGFVLSLSGGADSSACAIMVAEMIRKGLKELGLTAFLQKSNMETLFDLPALQHLPFEEQAKKI 366 (634)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCGGGCCSSCSSCTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 98764207888764047776767862055769999999999987776332222245525555445665313334441037
Q ss_pred EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCHHHHHC--CCCC--CC-EEC-CC
Q ss_conf 999987047876655557788189999999999980995898170788663224411267870--8861--20-000-15
Q gi|254780151|r 48 IGVTLQLYNSRKASKRKGSCCAGQDVYDARRVCDTINVSHYVFDYEERFRNAVIVPFASSYAA--GETP--LP-CVD-CN 121 (408)
Q Consensus 48 ~g~~m~~~~~~~~~~~~~~c~~~~d~~~a~~va~~LgI~~~~~d~~~~f~~~V~~~~~~~y~~--G~TP--NP-c~~-CN 121 (408)
.++.|-..- .+..-.+++...+|+.+|+.|||+++++++.+.+... ...... +..+ .+ ++. =|
T Consensus 367 ~~~~mp~~y------~s~~~~~d~t~~~A~~la~~lg~~~~~i~I~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~eN 435 (634)
T 3ilv_A 367 TAVFLTTAY------QSTRNSGDETYTSAKTLAESIGATFYNWSVDEEIEQY-----KATIENVIERPLTWEKDDITLQN 435 (634)
T ss_dssp HHHHEEEEE------EECTTCCSHHHHHHHHHHHHHTCEEEEEECHHHHHHH-----HHHHHHHTTSCCCTTTCHHHHHH
T ss_pred EEEECCCCC------CCCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHH-----HHHHHHHHCCCCCCCCCHHHHHH
T ss_conf 898658754------4677616889999999999718815788610899999-----97644320367676300334441
Q ss_pred --CEEEHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCHHHCEEECCCCCCCHHH
Q ss_conf --411058888874016876452253110254126787731688531578787318986302022100334256899789
Q gi|254780151|r 122 --RTVKFSDLLSVTRQLGADVLATGHYIRSRLYVGDDGKRRRIMCRPMDLERDQSYFLFATTQQQLCDLRFPLGDMKKES 199 (408)
Q Consensus 122 --~~iKF~~l~~~a~~~g~~~iATGHYar~~~~~~~~~~~~~~L~r~~D~~KDQSYfL~~l~~~~L~~~~FPlg~~~K~e 199 (408)
.++.--.|+..|.+.|.=.+.||.= .+...| - +++.. .....+-|++++.|.+
T Consensus 436 iqaR~R~~~l~~~an~~~~lvl~TgN~--SE~a~G------------y----------~T~~G-D~~~~~~pi~~l~Kt~ 490 (634)
T 3ilv_A 436 IQARGRAPIIWMLTNVKQALLITTSNR--SEGDVG------------Y----------ATMDG-DTAGGIAPIAGVDKDF 490 (634)
T ss_dssp HHHHTTHHHHHHHHHHHTCEEBCCCCH--HHHHTT------------C----------SCTTT-TTCSSBBTTTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHCCEEEECCCCC--CCCEEC------------C----------EECCC-CCCCCCCCCCCCCHHH
T ss_conf 455677999999775479799857987--771041------------1----------03158-7666664016872899
Q ss_pred HHHHHHHCC
Q ss_conf 899997412
Q gi|254780151|r 200 VRDLAREMG 208 (408)
Q Consensus 200 VR~~A~~~g 208 (408)
||.+|+.++
T Consensus 491 v~~l~~~~~ 499 (634)
T 3ilv_A 491 IRSWLRWAE 499 (634)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999963