HHsearch alignment for GI: 254780153 and conserved domain: COG0001
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism].
Probab=98.35 E-value=0.00027 Score=46.74 Aligned_cols=297 Identities=15% Similarity=0.088 Sum_probs=151.8
Q ss_pred HHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC--CCCCEEEEEECCHHH---HHHHHHH----HCCCC---------C
Q ss_conf 9999996889985799974873489998753205--789707997073688---8887653----23876---------3
Q gi|254780153|r 55 QLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL--GYRGVDVLAWESFGL---GWMSDIR----QLSLQ---------D 116 (391)
Q Consensus 55 ~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~--~~~~~~~~~~g~~~~---r~~~~~~----~~~~~---------~ 116 (391)
T Consensus 100 ell~~~~p~~--e~vrf-vnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a 176 (432)
T COG0001 100 ELLIERVPSI--EKVRF-VNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVA 176 (432)
T ss_pred HHHHHHCCCC--CEEEE-ECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHH
T ss_conf 9999865865--08998-60640899999999987647975999728888871187842676755578999999973453
Q ss_pred EEEEECCCCCCCCHHHC-CC-CCCEEEEEEECC---CCEEECCEE------EECCCCCCEEEEEECCHHHHCCC----CC
Q ss_conf 06740577765786767-85-565799742024---202203203------50256861488640110110254----55
Q gi|254780153|r 117 VREFTAPYGSLPDFSKV-DF-DRDVVFVWNGTT---SGVCVPDVG------FIPESREGLVICDATSAVFARHI----DF 181 (391)
Q Consensus 117 ~~~~~~~~g~~~~~~~~-~~-~~~v~~~h~ETs---tGv~~~~~~------~~~~~~~~llivD~vSs~g~~p~----d~ 181 (391)
T Consensus 177 ~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~ 256 (432)
T COG0001 177 KHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGY 256 (432)
T ss_pred CCEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCC
T ss_conf 44788457999999999987689679999542467889898987899999999997194899862212045477642010
Q ss_pred CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 68579997001200176651544567788876541144577831232001123210334786446664488999999998
Q gi|254780153|r 182 NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALL 261 (391)
Q Consensus 182 ~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~ 261 (391)
T Consensus 257 ~gi~PDlttlGKiIGGGlP~ga~gGr~eiM~~---~~p~g~v----------------yqaGT~sgnpl-amaAG~atl~ 316 (432)
T COG0001 257 YGVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQ---LAPLGPV----------------YQAGTLSGNPL-AMAAGLATLE 316 (432)
T ss_pred CCCCCCHHHHHHHHCCCCCEEEECCHHHHHHH---HCCCCCC----------------CCCCCCCCCHH-HHHHHHHHHH
T ss_conf 08696333222440477520112569999963---2778876----------------45677788689-9999999999
Q ss_pred HHHCCCC-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 6201031-899999999779999999874797167668820036531789824731011373456788899999888628
Q gi|254780153|r 262 WLKKMGG-LSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSICMKIVDSDIASLDINSQKSFCKSMLSFLEKEE 340 (391)
Q Consensus 262 ~i~~~gG-l~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g 340 (391)
T Consensus 317 ~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g-~~~~v~--~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~G 393 (432)
T COG0001 317 ELMTEEGVYERLDALGERLAEGLRAAAERHG-IPLTVN--RVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRG 393 (432)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEE--EECCEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCC
T ss_conf 9873651899999999999999999999839-985886--2042589995589988899998635699999999999688
Q ss_pred EEECCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 287266556767505686-15888999999999999999999999
Q gi|254780153|r 341 IAYDIGSYRDAPLGLRVW-VGVTVEKEDLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 341 ~~~~~~~~r~~~~~~RIg-~~g~i~~~dv~~L~~aLe~~~~~~k~ 384 (391)
T Consensus 394 V~l-------~ps~~ea~flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 394 VYL-------APSQFEAGFLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred CCC-------CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 234-------77555545520046899999999999999998633