HHsearch alignment for GI: 254780153 and conserved domain: COG0076

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism].
Probab=99.24  E-value=8.8e-09  Score=75.20  Aligned_cols=278  Identities=16%  Similarity=0.113  Sum_probs=172.5

Q ss_pred             CCCCCCCCCHHHHHHHHHHHC---CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---C
Q ss_conf             688877689689999863210---3653289889999999999999996889985799974873489998753205---7
Q gi|254780153|r   16 FSSGPCAKRPGWSLGILEGAL---LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---G   89 (391)
Q Consensus        16 F~pGP~~~~p~~v~~~~~~~~---l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---~   89 (391)
T Consensus        67 ~~~~~~~~-~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~-t~GgTean~lal~aar~~~~  144 (460)
T COG0076          67 AGFCPTRV-PPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTF-TSGGTEANLLALLAARERWR  144 (460)
T ss_pred             ECCCCCCC-HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEE-ECCHHHHHHHHHHHHHHHHH
T ss_conf             63578886-79999999998734799812383158889999999999957997660679-61707999999999999987


Q ss_pred             C--C--------C-EEE-EEECCHHHHHHHHHHHCCCCCEEEEECCC-CCCCCHHHCC----CCCC---EEEEEEECCCC
Q ss_conf             8--9--------7-079-97073688888765323876306740577-7657867678----5565---79974202420
Q gi|254780153|r   90 Y--R--------G-VDV-LAWESFGLGWMSDIRQLSLQDVREFTAPY-GSLPDFSKVD----FDRD---VVFVWNGTTSG  149 (391)
Q Consensus        90 ~--~--------~-~~~-~~~g~~~~r~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~----~~~~---v~~~h~ETstG  149 (391)
T Consensus       145 ~~~~~~~~~~~~~P~ii~s~~aH~s~~---Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G  221 (460)
T COG0076         145 KRALAESGKPGGKPNIVCSETAHFSFE---KAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTG  221 (460)
T ss_pred             HHHHHCCCCCCCCCEEEECCCCCEEHH---HHHHHHCCCCEEEEEECCCEEECHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             664420234468874994574312099---99998188523787524750568999999998746476499972688887


Q ss_pred             EEECCEEE--ECCCCCCEEEEEECCHHHHCCCC---------CCCCEEEEECCHHCCCCCCCCEEEEECHH-HHHHHHHC
Q ss_conf             22032035--02568614886401101102545---------56857999700120017665154456778-88765411
Q gi|254780153|r  150 VCVPDVGF--IPESREGLVICDATSAVFARHID---------FNKLDVVTFSAQKVLGGEAGFGIIILSPA-SVERLEKY  217 (391)
Q Consensus       150 v~~~~~~~--~~~~~~~llivD~vSs~g~~p~d---------~~~iDv~~a~sQK~l~~ppGl~~v~~s~~-al~~~~~~  217 (391)
T Consensus       222 ~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~  301 (460)
T COG0076         222 SIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIF  301 (460)
T ss_pred             CCCCHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHC
T ss_conf             77889999999997699789873440021102474225351788820899886427788887069999688984677612


Q ss_pred             CCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             44577831232001123210334786446664488999999998620103189999999977999999987479716766
Q gi|254780153|r  218 VPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLA  297 (391)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~  297 (391)
T Consensus       302 ~~-~yl~~~-----------~~~~~ti~~sr~~~~~~~~~~~l~~lG~e-Gy~~l~~~~~~~a~~la~~l~~~~~~e~~~  368 (460)
T COG0076         302 AD-YYLPGG-----------GIPNFTILGSRPGRQALALYANLRRLGRE-GYRKLLDRTLELARYLAEELEKLGDFELVN  368 (460)
T ss_pred             CC-CCCCCC-----------CCCCEEEEEECCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
T ss_conf             36-677877-----------86663688505418999999999996788-899999999999999999986478827633


Q ss_pred             CCCCCCCCCEEEEEECCC
Q ss_conf             882003653178982473
Q gi|254780153|r  298 VDETTRSNTSICMKIVDS  315 (391)
Q Consensus       298 ~~~~~rS~~~v~~~~~d~  315 (391)
T Consensus       369 -~p---~l~~V~fr~~~~  382 (460)
T COG0076         369 -EP---ELPIVAFRLKDD  382 (460)
T ss_pred             -CC---CCEEEEEECCCC
T ss_conf             -88---650799965764