HHsearch alignment for GI: 254780153 and conserved domain: COG1168
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].
Probab=97.84 E-value=0.0027 Score=40.33 Aligned_cols=308 Identities=18% Similarity=0.177 Sum_probs=162.2
Q ss_pred CHHHHHHHHHH----HCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 96899998632----10365328988999999999999999688998579997487348999875320578970799707
Q gi|254780153|r 24 RPGWSLGILEG----ALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLAWE 99 (391)
Q Consensus 24 ~p~~v~~~~~~----~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~~g 99 (391)
T Consensus 40 pp~-i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~-r~~~~i~~e~-i~~~p-~VVpgi~~~I~~~T~~gd~Vvi~tP 115 (388)
T COG1168 40 PPE-IIEALRERVDHGVFGYPYGSDELYAAIAHWFKQ-RHQWEIKPEW-IVFVP-GVVPGISLAIRALTKPGDGVVIQTP 115 (388)
T ss_pred CHH-HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH-HCCCCCCCCE-EEECC-CCHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 879-999999998658778878877899999999997-1377788552-89837-5127699999983769982696488
Q ss_pred CHHHHHHHHHHHCCCC--CEEEEECCCCCCCCHHHCCCC------CCEEEEEEECCCCEEECCEE-----EECCCCCCEE
Q ss_conf 3688888765323876--306740577765786767855------65799742024202203203-----5025686148
Q gi|254780153|r 100 SFGLGWMSDIRQLSLQ--DVREFTAPYGSLPDFSKVDFD------RDVVFVWNGTTSGVCVPDVG-----FIPESREGLV 166 (391)
Q Consensus 100 ~~~~r~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~------~~v~~~h~ETstGv~~~~~~-----~~~~~~~~ll 166 (391)
T Consensus 116 vY~-PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~V 194 (388)
T COG1168 116 VYP-PFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRV 194 (388)
T ss_pred CCH-HHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 861-8999875169679746643469847752999999984377608999379999986436999999999999839989
Q ss_pred EEEECCH---HHH-CCCCC-------CCCEEEEECCHHCCCCCCCC--EEEEECHHHHHHHHHCCCCCCCCCHHHCCHHH
Q ss_conf 8640110---110-25455-------68579997001200176651--54456778887654114457783123200112
Q gi|254780153|r 167 ICDATSA---VFA-RHIDF-------NKLDVVTFSAQKVLGGEAGF--GIIILSPASVERLEKYVPSWPLPKIFRMVKGG 233 (391)
Q Consensus 167 ivD~vSs---~g~-~p~d~-------~~iDv~~a~sQK~l~~ppGl--~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~ 233 (391)
T Consensus 195 ISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNl-aGL~~a~~Ii~n~~lr~~--------------~~~~l 259 (388)
T COG1168 195 ISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNL-AGLKCAYIIISNRELRAK--------------FLKRL 259 (388)
T ss_pred EEECCCCCCCCCCCCCCCHHHCCHHHHCCEEEEEECCCCCCC-HHHHHEEEEECCHHHHHH--------------HHHHH
T ss_conf 830335661216987665432695543235998405221560-444421478348899999--------------99999
Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCEEEE
Q ss_conf 32103347864466644889999999986201031--89999999977999999987479-7167668820036531789
Q gi|254780153|r 234 RVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGG--LSACVERCNANAAVLFQFIQEND-WIENLAVDETTRSNTSICM 310 (391)
Q Consensus 234 ~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gG--l~~~~~r~~~~a~~l~~~i~~~~-~~~~~~~~~~~rS~~~v~~ 310 (391)
T Consensus 260 ~-------~~~~~~~n~lg~~A~~aAY~----~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~g-------TYL 321 (388)
T COG1168 260 K-------RNGLHGPSALGIIATEAAYN----QGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQG-------TYL 321 (388)
T ss_pred H-------HHCCCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC-------CEE
T ss_conf 8-------73379984688999999997----26499999999999989999999986598747866887-------566
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHH-HHHHCCEEECCCC-CCCCCCE-EEEE--CCCCCCHHHHHHHHHHHH
Q ss_conf 824731011373456788899999-8886282872665-5676750-5686--158889999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLS-FLEKEEIAYDIGS-YRDAPLG-LRVW--VGVTVEKEDLLLLCDWLR 376 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~-~l~~~g~~~~~~~-~r~~~~~-~RIg--~~g~i~~~dv~~L~~aLe 376 (391)
T Consensus 322 ~WLD~r~l~l~d~-------~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~ 385 (388)
T COG1168 322 AWLDCRELGLDDS-------ELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALK 385 (388)
T ss_pred EEEECCCCCCCHH-------HHHHHHHHHHCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 6532002389857-------899999975157135787567678745888637988999999999999985