HHsearch alignment for GI: 254780153 and conserved domain: COG1921
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism].
Probab=98.06 E-value=0.00055 Score=44.74 Aligned_cols=214 Identities=21% Similarity=0.241 Sum_probs=120.5
Q ss_pred CCCCCHHHHHHHHHHHC-----CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEE
Q ss_conf 77689689999863210-----3653289889999999999999996889985799974873489998753205789707
Q gi|254780153|r 20 PCAKRPGWSLGILEGAL-----LGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVD 94 (391)
Q Consensus 20 P~~~~p~~v~~~~~~~~-----l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~ 94 (391)
T Consensus 36 ~s~~~~e-~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~---~~~~~~~~aea~~iv-nnn~aAVll~~~al~~~~EvV 110 (395)
T COG1921 36 RSLYSPE-AIEAMKEAMRAPVELETDLKTGKRGARLTELA---ELLCGLTGAEAAAIV-NNNAAAVLLTLNALAEGKEVV 110 (395)
T ss_pred CCCCCHH-HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH---HHHHCCCCHHHEEEE-CCCHHHHHHHHHHHCCCCEEE
T ss_conf 7667989-99999998505430356401231357779999---998366440332567-882899999876320577179
Q ss_pred E----EEE-CCHHHHHHHHHHHCCCCCEEEE-ECCCCCCCCHH-HCCCC-CCEEEEEEEC--CCCEEECC--EEEECCCC
Q ss_conf 9----970-7368888876532387630674-05777657867-67855-6579974202--42022032--03502568
Q gi|254780153|r 95 V----LAW-ESFGLGWMSDIRQLSLQDVREF-TAPYGSLPDFS-KVDFD-RDVVFVWNGT--TSGVCVPD--VGFIPESR 162 (391)
Q Consensus 95 ~----~~~-g~~~~r~~~~~~~~~~~~~~~~-~~~~g~~~~~~-~~~~~-~~v~~~h~ET--stGv~~~~--~~~~~~~~ 162 (391)
T Consensus 111 is~g~lV~gg~~--~-v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~ta~llkV~s~~~~f~~~-l~~~~l~~ia~~~ 186 (395)
T COG1921 111 VSRGELVEGGAF--R-VPDIIRLAGAKLVEVGTTNRTHLKDYELAINENTALLLKVHSSNYGFTGM-LSEEELVEIAHEK 186 (395)
T ss_pred EECCCCCCCCCC--C-HHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCC-CCHHHHHHHHHHC
T ss_conf 971311568899--8-66799971977998156576778889988545870589995036661464-5599999999876
Q ss_pred CCEEEEEECCHHHHC------CCCCCCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHH
Q ss_conf 614886401101102------54556857999700120017665154456778887654114457783123200112321
Q gi|254780153|r 163 EGLVICDATSAVFAR------HIDFNKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVM 236 (391)
Q Consensus 163 ~~llivD~vSs~g~~------p~d~~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (391)
T Consensus 187 ~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkKelI~~lq~~~l~----Ralrv------- 254 (395)
T COG1921 187 GLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKKELIEKLQSHPLK----RALRV------- 254 (395)
T ss_pred CCCEEEECCCCCCCCCCCCHHHHHHCCCCEEEEECCHHCCCCC-CCEEECHHHHHHHHHHHHHH----HHHHC-------
T ss_conf 9977996677630035544568886079789975401127985-43374249999999762133----43315-------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 033478644666448899999999862010
Q gi|254780153|r 237 EGLFCGETINTPSLLCIEDYIDALLWLKKM 266 (391)
Q Consensus 237 ~~~~~~~~~~TP~v~~i~al~~~l~~i~~~ 266 (391)
T Consensus 255 ----------~K~--tla~l~~aLe~y~~~ 272 (395)
T COG1921 255 ----------DKE--TLAALEAALELYLQP 272 (395)
T ss_pred ----------CCH--HHHHHHHHHHHHCCC
T ss_conf ----------827--689999999987080