HHsearch alignment for GI: 254780153 and conserved domain: COG1982

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism].
Probab=98.29  E-value=0.00024  Score=47.05  Aligned_cols=289  Identities=14%  Similarity=0.116  Sum_probs=158.6

Q ss_pred             HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE-EECCHHHHHHHHHHHCCCCCEEEEEC---C-
Q ss_conf             999999999999688998579997487348999875320578970799-70736888887653238763067405---7-
Q gi|254780153|r   49 RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL-AWESFGLGWMSDIRQLSLQDVREFTA---P-  123 (391)
Q Consensus        49 i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~-~~g~~~~r~~~~~~~~~~~~~~~~~~---~-  123 (391)
T Consensus        71 ~i~eAqe~aA~~fgAd~t---yFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glila--G-a~Pvyl~p~~np~  144 (557)
T COG1982          71 PIKEAQELAARVFGADHT---YFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILA--G-ATPVYLEPSRNPL  144 (557)
T ss_pred             CHHHHHHHHHHHHCCCCE---EEEECCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHC--C-CCEEEECCCCCCC
T ss_conf             388999999998688862---999778228999999860389998996587637888899874--8-8327841777854


Q ss_pred             CCCC--CCHHHCCC------CC-CEEEEEEECCCCEEECCEEEE--CCCCCCEEEEEECCHHH--HCC----CCC-CCCE
Q ss_conf             7765--78676785------56-579974202420220320350--25686148864011011--025----455-6857
Q gi|254780153|r  124 YGSL--PDFSKVDF------DR-DVVFVWNGTTSGVCVPDVGFI--PESREGLVICDATSAVF--ARH----IDF-NKLD  185 (391)
Q Consensus       124 ~g~~--~~~~~~~~------~~-~v~~~h~ETstGv~~~~~~~~--~~~~~~llivD~vSs~g--~~p----~d~-~~iD  185 (391)
T Consensus       145 ~gi~ggI~~~~~~~al~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~  224 (557)
T COG1982         145 YGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGAD  224 (557)
T ss_pred             CCCCCCCCHHHHHHHHHHCHHHHHEEEEECCCCCEEEECHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCHHHHCCCE
T ss_conf             46537869899879998471304068896485324760599999997531866888645774335555574114545743


Q ss_pred             EEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             99970012001766515445677888765411445778312320011232103347864466644889999999986201
Q gi|254780153|r  186 VVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKK  265 (391)
Q Consensus       186 v~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~  265 (391)
T Consensus       225 ~~tqS~HK~l~alSQaS~iHv~~~---------------~~~~~~r~nea~~~---h~--STSPsY~l~ASlD~Ar~~~~  284 (557)
T COG1982         225 FVTQSTHKLLAALSQASMIHVKDG---------------RAVNHERFNEALMM---HQ--STSPSYPLMASLDVARMQEG  284 (557)
T ss_pred             EEEEEHHHHHHHHHHHHHHHHCCC---------------CCCCHHHHHHHHHH---HC--CCCCHHHHHHHHHHHHHHHH
T ss_conf             898105442123436678750887---------------65778999999998---80--67955899988999998754


Q ss_pred             CCCHHHH---HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-----------------CCCCEEEEEECCCCCCCCCHHHH
Q ss_conf             0318999---999997799999998747971676688200-----------------36531789824731011373456
Q gi|254780153|r  266 MGGLSAC---VERCNANAAVLFQFIQENDWIENLAVDETT-----------------RSNTSICMKIVDSDIASLDINSQ  325 (391)
Q Consensus       266 ~gGl~~~---~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~-----------------rS~~~v~~~~~d~~~~~~~~~~~  325 (391)
T Consensus       285 ~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~----------~  354 (557)
T COG1982         285 NAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPE----------F  354 (557)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC----------C
T ss_conf             334788888899999999999998876488640266555775332221223445420366079996577----------8


Q ss_pred             HHHHHHHHHHHHHCCEEECC-CCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             78889999988862828726-6556767505686158889999999999999
Q gi|254780153|r  326 KSFCKSMLSFLEKEEIAYDI-GSYRDAPLGLRVWVGVTVEKEDLLLLCDWLR  376 (391)
Q Consensus       326 ~~~~~~~~~~l~~~g~~~~~-~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe  376 (391)
T Consensus       355 Gipg~~v~~~L~e~gii~e~~~d~~~---lll~~~~~gk~~~lv~~L~~f~r  403 (557)
T COG1982         355 GIPGAIVAKYLREHGIIPEETGDYSN---LLLFSPGIGKWQTLVDRLLEFKR  403 (557)
T ss_pred             CCCHHHHHHHHHHCCCEEEECCCCEE---EEEEEECCCHHHHHHHHHHHHHH
T ss_conf             97399999999975881453177324---67863241067899999999987