HHsearch alignment for GI: 254780153 and conserved domain: COG2008
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism].
Probab=99.11 E-value=8.2e-08 Score=69.06 Aligned_cols=305 Identities=14% Similarity=0.035 Sum_probs=177.1
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE
Q ss_conf 88877689689999863210365328988999999999999999688998579997487348999875320578970799
Q gi|254780153|r 17 SSGPCAKRPGWSLGILEGALLGRSHRCVLGKERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVL 96 (391)
Q Consensus 17 ~pGP~~~~p~~v~~~~~~~~l~~sHRs~~f~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~ 96 (391)
T Consensus 9 ~~g~~---~~-m~eam~~a~~~-~~~~YG~D~~~~~~e~~~ae~~g~-~--a~~Fv-~sGT~aN~lal~~~~~~~~~vi~ 79 (342)
T COG2008 9 VAGPT---PE-MREALAAANAV-GDDVYGEDPTTNALEQRIAELFGK-E--AALFV-PSGTQANQLALAAHCQPGESVIC 79 (342)
T ss_pred CCCCC---HH-HHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHHCC-C--EEEEE-CCCCHHHHHHHHHHCCCCCEEEE
T ss_conf 67879---99-99999855245-787778888999999999998577-4--49992-68438889999986489976998
Q ss_pred EECCHHHHH-HHHHHHCCCC-CEEEEECCCCCCCCHHHCCCC---CC------EEEEEEECCC--CEEECCEEE-----E
Q ss_conf 707368888-8765323876-306740577765786767855---65------7997420242--022032035-----0
Q gi|254780153|r 97 AWESFGLGW-MSDIRQLSLQ-DVREFTAPYGSLPDFSKVDFD---RD------VVFVWNGTTS--GVCVPDVGF-----I 158 (391)
Q Consensus 97 ~~g~~~~r~-~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~---~~------v~~~h~ETst--Gv~~~~~~~-----~ 158 (391)
T Consensus 80 ~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gkl-t~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~ 158 (342)
T COG2008 80 HETAHIYTDECGAPEFFGGGQKLPIVPGADGKL-TPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAV 158 (342)
T ss_pred ECCCCCEECCCCCHHHHCCCCEECCCCCCCCCC-CHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEECCHHHHHHHHHH
T ss_conf 525312023567588873885430479877873-9999997636777655887507986136778666489999999999
Q ss_pred CCCCCCEEEEEEC------CHHHHCCC-CCC-CCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCC
Q ss_conf 2568614886401------10110254-556-857999700120017665154456778887654114457783123200
Q gi|254780153|r 159 PESREGLVICDAT------SAVFARHI-DFN-KLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMV 230 (391)
Q Consensus 159 ~~~~~~llivD~v------Ss~g~~p~-d~~-~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~ 230 (391)
T Consensus 159 ~k~~~l~LHmDGAR~~nA~valg-~~~~~~~~~~D~v~~~~tK~g~-~~~gAiv~gn~~~~~~a~~~rK~---------- 226 (342)
T COG2008 159 CKEHGLPLHMDGARLANALVALG-VALKTIKSYVDSVSFCLTKGGG-APVGAIVFGNRDFAKRARRWRKR---------- 226 (342)
T ss_pred HHHHCCCEEECHHHHHHHHHHCC-CCHHHHHHHCCEEEEECCCCCC-CEEEEEEECCHHHHHHHHHHHHH----------
T ss_conf 99809954404088988998739-8889987428899991314775-21325897389999998999998----------
Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
Q ss_conf 112321033478644666448899999999862010318999999997-7999999987479716766882003653178
Q gi|254780153|r 231 KGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNA-NAAVLFQFIQENDWIENLAVDETTRSNTSIC 309 (391)
Q Consensus 231 ~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~-~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~ 309 (391)
T Consensus 227 ----------~Ggl~-----~k~r~laA~~~~~l~~-~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~-----~~tN~v 285 (342)
T COG2008 227 ----------AGGLM-----RKARFLAAQGLYALED-DVWRLAADHANAMAARLAEGLEAKPGVKLAFP-----VETNMV 285 (342)
T ss_pred ----------HCCCH-----HHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC-----CCCCEE
T ss_conf ----------65627-----6654899999999731-58888878889999999976532689434367-----766279
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 982473101137345678889999988862828726655676750568615888999999999999999
Q gi|254780153|r 310 MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWV 378 (391)
Q Consensus 310 ~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~ 378 (391)
T Consensus 286 f~~l~~~~------i~---~l~~~~~~~~~~~~~--~~~~---~~vRfvts~a~~~edv~~~~~~~~~~ 340 (342)
T COG2008 286 FVRLPESA------IE---ALRLAGALFYRGVLI--GAHG---EIVRFVTSWATSEEDVDELVAAIKAL 340 (342)
T ss_pred EEECCHHH------HH---HHHHHCHHHEEEEEC--CCCC---CEEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 99777678------89---997515212001221--5777---55899850249999999999999996