HHsearch alignment for GI: 254780153 and conserved domain: PRK00854
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed.
Probab=99.05 E-value=2.1e-07 Score=66.52 Aligned_cols=306 Identities=13% Similarity=0.123 Sum_probs=161.2
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---------CCC-C
Q ss_conf 968999986321036532898899-99999999999996889985799974873489998753205---------789-7
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---------GYR-G 92 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---------~~~-~ 92 (391)
T Consensus 62 ~p~-v~~Ai~~q~~~l~~~~~~~~~~~~~~l~~~l~---~~~~~~~v~f~-~SGsEAve~AiklAr~~~~~~~g~~tgr~ 136 (404)
T PRK00854 62 HPK-ILAAMVEQAGRLTLTSRAFRNDQLAPLYEELA---ALTGSHKVLPM-NSGAEAVETAIKAVRKWGYEVKGVPEGQA 136 (404)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH---HCCCCCEEEEC-CCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 799-99999999856786555426579999999997---40376848855-87799999999999998765037878985
Q ss_pred EEEEEECCHHHHHHHHHHHCCCCCEE---------EEECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECC------
Q ss_conf 07997073688888765323876306---------7405777657867678556579974202420---22032------
Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLSLQDVR---------EFTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPD------ 154 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~~~~~~---------~~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~------ 154 (391)
T Consensus 137 ~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~~d~~~l~~~-~~~~~aAviiEPiqg~gG~~~~~~~yl~~ 215 (404)
T PRK00854 137 EIIVCADNFHGRTLSIVGFSTDPDARGGFGPFAPGFRVVPFGDAAALEAA-ITPNTVAFLIEPIQGEAGVIIPPAGYFRR 215 (404)
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHH-HCCCEEEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 59996456678601354346774335688899998155056668999986-39874899991775778961799899999
Q ss_pred EEEECCCCCCEEEEEECCHHHHCC---C--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 035025686148864011011025---4--5568579997001200176-651544567788876541144577831232
Q gi|254780153|r 155 VGFIPESREGLVICDATSAVFARH---I--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPSWPLPKIFR 228 (391)
Q Consensus 155 ~~~~~~~~~~llivD~vSs~g~~p---~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~~~~~~~~~ 228 (391)
T Consensus 216 lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PDii~~gKgl~gG~~Pl~av~~~~~i~~~~~---~--------- 283 (404)
T PRK00854 216 VRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLR---P--------- 283 (404)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCCCEEECCHHHHHHCC---C---------
T ss_conf 9999997076445750001786355741455424897989756444588765320204799995067---9---------
Q ss_pred CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf 00112321033478644666448899999999862010318999999997799999998747971676688200365317
Q gi|254780153|r 229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSI 308 (391)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v 308 (391)
T Consensus 284 ----------~~h~~T~~g-npla~aaa~a~l~~i~~e~----l~~~~~~~g~~l~~~L~~l~--~~~i~--~VRG~Glm 344 (404)
T PRK00854 284 ----------GQHGSTFGG-NPLACAVARAALRVLVEEG----MIENAAEQGAYFLEGLRAIR--GNIVR--EVRGRGLM 344 (404)
T ss_pred ----------CCCCCCCCC-CHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHCC--CCCEE--EEEECCEE
T ss_conf ----------887788898-9899999999999998658----99999999999999998504--89727--66444559
Q ss_pred E-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8-98247310113734567888999998886282872665567675056861588899999999999999999
Q gi|254780153|r 309 C-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFY 380 (391)
Q Consensus 309 ~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~ 380 (391)
T Consensus 345 ~gve~-~~~---------~~~~~~~~~~~~~~Gll~~~-~---~~~~ir~~PPL~it~~eid~~l~~l~~~La 403 (404)
T PRK00854 345 LAVEL-EPE---------AGGARQYCEALKARGLLAKD-T---HDHTIRLAPPLVITREQVDWAVSQIAKVLA 403 (404)
T ss_pred EEEEE-ECC---------HHHHHHHHHHHHHCCEEECC-C---CCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 99998-556---------67799999999979959874-8---999899979957899999999999999966