HHsearch alignment for GI: 254780153 and conserved domain: PRK03715
>PRK03715 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional.
Probab=98.99 E-value=1.8e-06 Score=60.53 Aligned_cols=308 Identities=15% Similarity=0.075 Sum_probs=155.3
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC------CCCC-EEE
Q ss_conf 968999986321036532898899-99999999999996889985799974873489998753205------7897-079
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL------GYRG-VDV 95 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~------~~~~-~~~ 95 (391)
T Consensus 54 ~p~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~la---~~L~~~-~~~~~v~f~~sGsEAvE~AlKlAr~y~~~~~~gr~~ii 128 (395)
T PRK03715 54 NPG-MVEALAAQAEKLINPSPAFYNEPMAKLA---GLLTQH-SCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEII 128 (395)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHH---HHHHCC-CCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 699-9999999997547677320278999999---998415-58887998187588999999999998624689984599
Q ss_pred EEECCHHHHHHHHHHHCCCCCEEE------EECCCCCCCCHHHCCC--CCCEEEEEEECCCC---EEECC------EEEE
Q ss_conf 970736888887653238763067------4057776578676785--56579974202420---22032------0350
Q gi|254780153|r 96 LAWESFGLGWMSDIRQLSLQDVRE------FTAPYGSLPDFSKVDF--DRDVVFVWNGTTSG---VCVPD------VGFI 158 (391)
Q Consensus 96 ~~~g~~~~r~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~--~~~v~~~h~ETstG---v~~~~------~~~~ 158 (391)
T Consensus 129 ~~~~~yHG~T~~~~s~sg~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~aAviiEPiqg~gG~~~~~~~yl~~lr~l 208 (395)
T PRK03715 129 TFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPATREFMQQLRAL 208 (395)
T ss_pred EECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf 97578898740221046864445567898899675554558999973499807999937888779852988999999999
Q ss_pred CCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHCCH
Q ss_conf 25686148864011011025---4--55685--79997001200176651544567788876541144577831232001
Q gi|254780153|r 159 PESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFRMVK 231 (391)
Q Consensus 159 ~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~~~~ 231 (391)
T Consensus 209 c~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv--~~gKgl~gG~Pl~av~~~~~i-~---~------------~~- 269 (395)
T PRK03715 209 TKQHGLLLIVDEVQTGCGRTGTLFAYELAGIEPDIM--TLGKGIGGGVPLAALLAKAEV-A---V------------FE- 269 (395)
T ss_pred HHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEE--EECCHHHCCCCEEEEEECHHH-C---C------------CC-
T ss_conf 951897356201103888666853000489999989--975244289852899982674-2---4------------77-
Q ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE-E
Q ss_conf 123210334786446664488999999998620103189999999977999999987479716766882003653178-9
Q gi|254780153|r 232 GGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSIC-M 310 (391)
Q Consensus 232 ~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v~-~ 310 (391)
T Consensus 270 ------~g~~g~T~~gnpla-~aaa~a~L~~i~~~~----l~~~~~~~g~~l~~~L~~l~~~~~-i~~--vRG~Gl~~~i 335 (395)
T PRK03715 270 ------AGDQGGTYNGNPLM-TAVGYAVISQLVAPG----FLEGVRARGEYLKEKLLELSAERG-LEG--ERGEGLLRAL 335 (395)
T ss_pred ------CCCCCCCCCCCHHH-HHHHHHHHHHHHCCC----HHHHHHHHHHHHHHHHHHHHCCCC-CEE--EEECCEEEEE
T ss_conf ------89888798997189-999999999996268----999999999999999998650399-135--7435589999
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 824731011373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r 311 KIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 311 ~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
T Consensus 336 el~~~~~--------~~-~~~~~~~~~~~gll~~~-~---~~n~irl~PpL~it~~eid~~~~~l~~aL~~l 394 (395)
T PRK03715 336 LLGKDIG--------PQ-IVEKARDMQPDGLLLNA-P---RPNLLRFMPALNVTTDEIDQMIAMLRSVLDKL 394 (395)
T ss_pred EECCCCC--------HH-HHHHHHHHHHCCEEEEC-C---CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9678870--------89-99999999839989922-8---99989997994388999999999999999986