HHsearch alignment for GI: 254780153 and conserved domain: PRK04073
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional.
Probab=98.88 E-value=6e-06 Score=57.22 Aligned_cols=300 Identities=14% Similarity=0.122 Sum_probs=163.8
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---------CCC-C
Q ss_conf 96899998632103653289889-999999999999996889985799974873489998753205---------789-7
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---------GYR-G 92 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---------~~~-~ 92 (391)
T Consensus 58 ~p~-v~~Ai~~q~~~~~~~~~~~~~~~~~~~~e~l~~l~~~--~-~v~f-~~sGseAvE~AlklAr~~~~~~~~~~~~r~ 132 (396)
T PRK04073 58 HPK-IIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGK--D-MVLP-MNTGAEAVETAIKAARRWAYDVKGVEPNKA 132 (396)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC--C-EEEE-CCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 799-9999999984178766532434789999999975283--6-4896-187888999999999999876237888987
Q ss_pred EEEEEECCHHHHHHHHHHHCCCCCE---------EEEECCCCCCCCHHHCC--CCCCEEEEEEECCCC---EEECC----
Q ss_conf 0799707368888876532387630---------67405777657867678--556579974202420---22032----
Q gi|254780153|r 93 VDVLAWESFGLGWMSDIRQLSLQDV---------REFTAPYGSLPDFSKVD--FDRDVVFVWNGTTSG---VCVPD---- 154 (391)
Q Consensus 93 ~~~~~~g~~~~r~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~--~~~~v~~~h~ETstG---v~~~~---- 154 (391)
T Consensus 133 ~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~p~~~~~~~~p~~---d~~~l~~~~~~~~AAvi~EPi~g~gG~~~p~~~yl 209 (396)
T PRK04073 133 EIIACEGNFHGRTMAAVSLSSEAEYKRGFGPMLPGIKKIPYG---DVEALKAAITPNTAAFLVEPIQGEAGINIPPEGFL 209 (396)
T ss_pred EEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEECCCC---HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHH
T ss_conf 799977750045320522267643345778999982325752---16678861489756999989877789778998999
Q ss_pred --EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf --0350256861488640110-110--254--5568579997001200176-6515445677888765411445778312
Q gi|254780153|r 155 --VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPSWPLPKI 226 (391)
Q Consensus 155 --~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~~~~~~~ 226 (391)
T Consensus 210 ~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~l~gG~~P~~av~~~~~i~~~~~---~------- 279 (396)
T PRK04073 210 KAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVKPDMYILGKALGGGVFPISCVAANRDILGVFT---P------- 279 (396)
T ss_pred HHHHHHHHHHCCEEECCCCEECCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCEEEEECCHHHHHHCC---C-------
T ss_conf 999999998399352663410788657630010046898801025345578776058960789996166---8-------
Q ss_pred HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r 227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT 306 (391)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~ 306 (391)
T Consensus 280 ------------~~h~~T~~gnp-la~aaa~a~L~~~~~~-~---l~~~~~~~g~~l~~~L~~l~--~~~i~--~vRG~G 338 (396)
T PRK04073 280 ------------GSHGSTFGGNP-LACAVSIAALDVIEEE-K---LPERSLELGEYFKEQLKEID--NPMIK--EVRGRG 338 (396)
T ss_pred ------------CCCCCCCCCCH-HHHHHHHHHHHHHHHC-C---HHHHHHHHHHHHHHHHHHCC--CCCEE--ECCCCE
T ss_conf ------------99760548898-9999999999999875-7---99999999999999998258--99748--723377
Q ss_pred EEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 178-9824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r 307 SIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF 379 (391)
Q Consensus 307 ~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~ 379 (391)
T Consensus 339 l~~giel~~~-------------~~~~~~~~~~~Gll~~~~----~~~~ir~~PpL~it~~eid~~l~~l~~~L 395 (396)
T PRK04073 339 LFIGVELNEP-------------ARPYCEALKEEGLLCKET----HETVIRFAPPLVISKEELDWALEKIKAVL 395 (396)
T ss_pred EEEEEEECCC-------------HHHHHHHHHHCCEEEEEC----CCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999995875-------------899999999499799527----99989997993689999999999999985