HHsearch alignment for GI: 254780153 and conserved domain: PRK04073

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional.
Probab=98.88  E-value=6e-06  Score=57.22  Aligned_cols=300  Identities=14%  Similarity=0.122  Sum_probs=163.8

Q ss_pred             CHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC---------CCC-C
Q ss_conf             96899998632103653289889-999999999999996889985799974873489998753205---------789-7
Q gi|254780153|r   24 RPGWSLGILEGALLGRSHRCVLG-KERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL---------GYR-G   92 (391)
Q Consensus        24 ~p~~v~~~~~~~~l~~sHRs~~f-~~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~---------~~~-~   92 (391)
T Consensus        58 ~p~-v~~Ai~~q~~~~~~~~~~~~~~~~~~~~e~l~~l~~~--~-~v~f-~~sGseAvE~AlklAr~~~~~~~~~~~~r~  132 (396)
T PRK04073         58 HPK-IIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGK--D-MVLP-MNTGAEAVETAIKAARRWAYDVKGVEPNKA  132 (396)
T ss_pred             CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC--C-EEEE-CCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             799-9999999984178766532434789999999975283--6-4896-187888999999999999876237888987


Q ss_pred             EEEEEECCHHHHHHHHHHHCCCCCE---------EEEECCCCCCCCHHHCC--CCCCEEEEEEECCCC---EEECC----
Q ss_conf             0799707368888876532387630---------67405777657867678--556579974202420---22032----
Q gi|254780153|r   93 VDVLAWESFGLGWMSDIRQLSLQDV---------REFTAPYGSLPDFSKVD--FDRDVVFVWNGTTSG---VCVPD----  154 (391)
Q Consensus        93 ~~~~~~g~~~~r~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~--~~~~v~~~h~ETstG---v~~~~----  154 (391)
T Consensus       133 ~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~p~~~~~~~~p~~---d~~~l~~~~~~~~AAvi~EPi~g~gG~~~p~~~yl  209 (396)
T PRK04073        133 EIIACEGNFHGRTMAAVSLSSEAEYKRGFGPMLPGIKKIPYG---DVEALKAAITPNTAAFLVEPIQGEAGINIPPEGFL  209 (396)
T ss_pred             EEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEECCCC---HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHH
T ss_conf             799977750045320522267643345778999982325752---16678861489756999989877789778998999


Q ss_pred             --EEEECCCCCCEEEEEECCH-HHH--CCC--CCCCCEEEEECCHHCCCCC-CCCEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf             --0350256861488640110-110--254--5568579997001200176-6515445677888765411445778312
Q gi|254780153|r  155 --VGFIPESREGLVICDATSA-VFA--RHI--DFNKLDVVTFSAQKVLGGE-AGFGIIILSPASVERLEKYVPSWPLPKI  226 (391)
Q Consensus       155 --~~~~~~~~~~llivD~vSs-~g~--~p~--d~~~iDv~~a~sQK~l~~p-pGl~~v~~s~~al~~~~~~~~~~~~~~~  226 (391)
T Consensus       210 ~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PDiv~~gK~l~gG~~P~~av~~~~~i~~~~~---~-------  279 (396)
T PRK04073        210 KAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVKPDMYILGKALGGGVFPISCVAANRDILGVFT---P-------  279 (396)
T ss_pred             HHHHHHHHHHCCEEECCCCEECCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCEEEEECCHHHHHHCC---C-------
T ss_conf             999999998399352663410788657630010046898801025345578776058960789996166---8-------


Q ss_pred             HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r  227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT  306 (391)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~  306 (391)
T Consensus       280 ------------~~h~~T~~gnp-la~aaa~a~L~~~~~~-~---l~~~~~~~g~~l~~~L~~l~--~~~i~--~vRG~G  338 (396)
T PRK04073        280 ------------GSHGSTFGGNP-LACAVSIAALDVIEEE-K---LPERSLELGEYFKEQLKEID--NPMIK--EVRGRG  338 (396)
T ss_pred             ------------CCCCCCCCCCH-HHHHHHHHHHHHHHHC-C---HHHHHHHHHHHHHHHHHHCC--CCCEE--ECCCCE
T ss_conf             ------------99760548898-9999999999999875-7---99999999999999998258--99748--723377


Q ss_pred             EEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             178-9824731011373456788899999888628287266556767505686158889999999999999999
Q gi|254780153|r  307 SIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVF  379 (391)
Q Consensus       307 ~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~  379 (391)
T Consensus       339 l~~giel~~~-------------~~~~~~~~~~~Gll~~~~----~~~~ir~~PpL~it~~eid~~l~~l~~~L  395 (396)
T PRK04073        339 LFIGVELNEP-------------ARPYCEALKEEGLLCKET----HETVIRFAPPLVISKEELDWALEKIKAVL  395 (396)
T ss_pred             EEEEEEECCC-------------HHHHHHHHHHCCEEEEEC----CCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf             9999995875-------------899999999499799527----99989997993689999999999999985