HHsearch alignment for GI: 254780153 and conserved domain: PRK04311
>PRK04311 selenocysteine synthase; Provisional.
Probab=97.52 E-value=0.008 Score=37.34 Aligned_cols=158 Identities=22% Similarity=0.273 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE-------ECCHHHHHHHHHHHCCCCCEEEE-EC
Q ss_conf 99999999996889985799974873489998753205789707997-------07368888876532387630674-05
Q gi|254780153|r 51 NKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLLGYRGVDVLA-------WESFGLGWMSDIRQLSLQDVREF-TA 122 (391)
Q Consensus 51 ~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~~~~~~~~~~-------~g~~~~r~~~~~~~~~~~~~~~~-~~ 122 (391)
T Consensus 132 ~~v~~ll~~ltgaE~---a~vVNNNA-aAv~L~l-~~la~gkEviVSRGelvEIGGsF--Ri-Pdim~~sGa~L~EVGtT 203 (465)
T PRK04311 132 RALAALLCELTGAED---ALVVNNNA-AAVLLAL-NALAAGKEVIVSRGELVEIGGAF--RI-PDVMRQAGAKLVEVGTT 203 (465)
T ss_pred HHHHHHHHHHHCCCE---EEEECCCH-HHHHHHH-HHHHCCCEEEEECCCEEEECCCC--CC-HHHHHHCCCEEEECCCC
T ss_conf 999999998549873---79982848-9999999-98627985999645356526765--62-78998659888743767
Q ss_pred CCCCCCCHHH-CCCCCC-EEEEEEE--CCCCEE----ECCEEEECCCCCCEEEEEECCHHH---------HCCC--C--C
Q ss_conf 7776578676-785565-7997420--242022----032035025686148864011011---------0254--5--5
Q gi|254780153|r 123 PYGSLPDFSK-VDFDRD-VVFVWNG--TTSGVC----VPDVGFIPESREGLVICDATSAVF---------ARHI--D--F 181 (391)
Q Consensus 123 ~~g~~~~~~~-~~~~~~-v~~~h~E--TstGv~----~~~~~~~~~~~~~llivD~vSs~g---------~~p~--d--~ 181 (391)
T Consensus 204 NrT~l~DY~~AI~~~Ta~llkvH~SN~~i~GFt~~v~~~eL~~l~~~~~ip~~~DlGSG~l~~~~~~gl~~Ep~v~~~l~ 283 (465)
T PRK04311 204 NRTHLRDYEDAINENTALLLKVHTSNYRIVGFTKEVSEAELAALGKEHGLPVVVDLGSGSLVDLSQYGLPDEPTVQELLA 283 (465)
T ss_pred CCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 88887999986495654899995687654674688999999999987599279988875213653126999998899997
Q ss_pred CCCEEEEECCHHCCCCCCCCEEEEECHHHHHHHHHC
Q ss_conf 685799970012001766515445677888765411
Q gi|254780153|r 182 NKLDVVTFSAQKVLGGEAGFGIIILSPASVERLEKY 217 (391)
Q Consensus 182 ~~iDv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~ 217 (391)
T Consensus 284 ~GaDLVtFSGDKLLGGP-QAGIIvGkk~lI~~lkkn 318 (465)
T PRK04311 284 AGVDLVTFSGDKLLGGP-QAGIIVGKKELIERLKKH 318 (465)
T ss_pred CCCCEEEEECCCCCCCC-CCCEEECHHHHHHHHHHC
T ss_conf 29988998554014798-543374009999999868