HHsearch alignment for GI: 254780153 and conserved domain: PRK04612
>PRK04612 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional.
Probab=99.15 E-value=6.1e-08 Score=69.89 Aligned_cols=313 Identities=15% Similarity=0.062 Sum_probs=160.6
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHHH-HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC-------CC-CC-E
Q ss_conf 9689999863210365328988999-9999999999996889985799974873489998753205-------78-97-0
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGKE-RINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWSLL-------GY-RG-V 93 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~~-i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~nl~-------~~-~~-~ 93 (391)
T Consensus 58 hp~-v~~Ai~~Q~~~l~~~~~~~~~~~~~~lae~L~~~~~--~~~~v~-f~~SGsEAvE~AlKlAr~y~~~~G~~~~k~~ 133 (408)
T PRK04612 58 DPD-LVAALTEQAGKLWHTSNVFFSAPPLKLAEELVTASR--FAEKVF-LCNSGTEANEAAIKLVRKWASSQGRPADKRV 133 (408)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC--CCCEEE-ECCCHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 899-999999998652576675226589999999972268--876699-7187468999999999999873288777769
Q ss_pred EEEEECCHHHHHHHHHHHCCCCCEEE---------EECCCCCCCCHHHCCCCCCEEEEEEECCCC---EEECC------E
Q ss_conf 79970736888887653238763067---------405777657867678556579974202420---22032------0
Q gi|254780153|r 94 DVLAWESFGLGWMSDIRQLSLQDVRE---------FTAPYGSLPDFSKVDFDRDVVFVWNGTTSG---VCVPD------V 155 (391)
Q Consensus 94 ~~~~~g~~~~r~~~~~~~~~~~~~~~---------~~~~~g~~~~~~~~~~~~~v~~~h~ETstG---v~~~~------~ 155 (391)
T Consensus 134 ii~~~~syHG~t~~als~t~~~~~~~~~~p~p~~~~~~~~~d~~~le~~~~~~~iAAvivEPi~g~gG~~~~~~~yl~~l 213 (408)
T PRK04612 134 IVTFRGSFHGRTLASVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARV 213 (408)
T ss_pred EEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 99985852598767422567843346888998852543667499999715699789999978678888306899999999
Q ss_pred EEECCCCCCEEEEEECCH-HHH--CCCCCC--CC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 350256861488640110-110--254556--85--79997001200176651544567788876541144577831232
Q gi|254780153|r 156 GFIPESREGLVICDATSA-VFA--RHIDFN--KL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKIFR 228 (391)
Q Consensus 156 ~~~~~~~~~llivD~vSs-~g~--~p~d~~--~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~~~ 228 (391)
T Consensus 214 ~~lc~~~gillI~DEV~TGfGRtG~~fa~~~~~v~PDii--~~gKglg~G~Pl~av~~~~~i~~~~~------------- 278 (408)
T PRK04612 214 RALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIV--TLAKALGGGFPIGAMLAGPKVAETMQ------------- 278 (408)
T ss_pred HHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCEE--EEEHHHCCCCCEEEEEECHHHHHHCC-------------
T ss_conf 999975694698501224788676203555128999989--97232238876289998688885146-------------
Q ss_pred CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
Q ss_conf 00112321033478644666448899999999862010318999999997799999998747971676688200365317
Q gi|254780153|r 229 MVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNTSI 308 (391)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~~v 308 (391)
T Consensus 279 ---------~~~h~~T~~gnpl-a~aaala~L~~i~~~~-l---~~~~~~~g~~l~~~L~~l~~~~~~i~--~vRG~GLm 342 (408)
T PRK04612 279 ---------FGAHGTTFGGNPL-AAAVARVALRKLASPQ-I---AANVARQSAALRAGLEALNAEFGVFA--QIRGRGLM 342 (408)
T ss_pred ---------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC-H---HHHHHHHHHHHHHHHHHHHHCCCCEE--EECCCCEE
T ss_conf ---------8997888873599-9999999999998666-9---99999999999999999874079888--32204469
Q ss_pred E-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8-982473101137345678889999988862828726655676750568615888999999999999999999999
Q gi|254780153|r 309 C-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQKI 384 (391)
Q Consensus 309 ~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~k~ 384 (391)
T Consensus 343 ~giel~~~~---------~~~~~~i~~~~~~~Gll~~~~g----~~~irl~PPL~it~~eide~l~~l~~al~~~~a 406 (408)
T PRK04612 343 LGAVLAPAH---------AGQAGAILDLAAEHGLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALAAYVA 406 (408)
T ss_pred EEEEECCCC---------CCHHHHHHHHHHHCCCEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999954788---------6269999999997891993179----997999688338899999999999999999982