HHsearch alignment for GI: 254780153 and conserved domain: PRK05093
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed.
Probab=99.12 E-value=2.4e-07 Score=66.11 Aligned_cols=306 Identities=14% Similarity=0.073 Sum_probs=163.1
Q ss_pred CHHHHHHHHHHHCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH-------CCCCC-CEE
Q ss_conf 968999986321036532898899-999999999999968899857999748734899987532-------05789-707
Q gi|254780153|r 24 RPGWSLGILEGALLGRSHRCVLGK-ERINKAIQLTRKVLEVPENYRIAIVPASDTGAVEMALWS-------LLGYR-GVD 94 (391)
Q Consensus 24 ~p~~v~~~~~~~~l~~sHRs~~f~-~i~~~~~~~l~~l~~~p~~y~v~~l~GsgT~~~ea~~~n-------l~~~~-~~~ 94 (391)
T Consensus 58 ~p~-I~~Ai~~Q~~~l~~~~~~~~~~~~~~lae~L~~~~--~~d-rv~f-~~SGSEAvE~AiklAr~~~~~~~~~~r~~i 132 (403)
T PRK05093 58 HPA-LVKALKEQGEKLWHISNVFTNEPALRLAKKLVDAT--FAE-RVFF-ANSGAEANEAALKLARRYACDRHGPEKTEI 132 (403)
T ss_pred CHH-HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC--CCC-EEEE-ECCHHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 799-99999999875577757414889999999986416--877-5998-386778999999999999997289987547
Q ss_pred EEEECCHHHHHHHHHHHCCCC----------CEEEEECCCCCCCCHHHCCC--CCCEEEEEEECCCC---EEECC-----
Q ss_conf 997073688888765323876----------30674057776578676785--56579974202420---22032-----
Q gi|254780153|r 95 VLAWESFGLGWMSDIRQLSLQ----------DVREFTAPYGSLPDFSKVDF--DRDVVFVWNGTTSG---VCVPD----- 154 (391)
Q Consensus 95 ~~~~g~~~~r~~~~~~~~~~~----------~~~~~~~~~g~~~~~~~~~~--~~~v~~~h~ETstG---v~~~~----- 154 (391)
T Consensus 133 i~~~~~yHG~t~~a~s-~~g~~~~~~~~~p~~~~~~~~p~~---d~~~l~~~~~~~iaAviiEPi~g~gG~~~~~~~yl~ 208 (403)
T PRK05093 133 IAFHNSFHGRTLFTVS-VGGQPKYSDGFGPKPADITHVPFN---DLAALKAVIDDKTCAVVVEPIQGEGGVIPATPEFLQ 208 (403)
T ss_pred EEECCCCCCCCHHHHH-HCCCCHHCCCCCCCCCCCEECCCC---CHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHH
T ss_conf 7775886888368776-258801102778999775655633---688886033774479999576678997589999999
Q ss_pred -EEEECCCCCCEEEEEECCHHHHCC---C--CCCCC--EEEEECCHHCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCH
Q ss_conf -035025686148864011011025---4--55685--799970012001766515445677888765411445778312
Q gi|254780153|r 155 -VGFIPESREGLVICDATSAVFARH---I--DFNKL--DVVTFSAQKVLGGEAGFGIIILSPASVERLEKYVPSWPLPKI 226 (391)
Q Consensus 155 -~~~~~~~~~~llivD~vSs~g~~p---~--d~~~i--Dv~~a~sQK~l~~ppGl~~v~~s~~al~~~~~~~~~~~~~~~ 226 (391)
T Consensus 209 ~lr~lc~~~gillI~DEV~tG~GRtG~~fa~e~~gv~PDiv--~~gKglggG~Plsav~~~~~i~~~~~----------- 275 (403)
T PRK05093 209 GLRELCDKHNALLIFDEVQTGMGRTGDLYAYMHYGVTPDIL--TSAKALGGGFPIGAMLTTAEIASHFK----------- 275 (403)
T ss_pred HHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCEE--EECCCCCCCCCEEEEEECHHHHHHCC-----------
T ss_conf 99986301683798601342688777752223689899889--97300158864279987288786507-----------
Q ss_pred HHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 32001123210334786446664488999999998620103189999999977999999987479716766882003653
Q gi|254780153|r 227 FRMVKGGRVMEGLFCGETINTPSLLCIEDYIDALLWLKKMGGLSACVERCNANAAVLFQFIQENDWIENLAVDETTRSNT 306 (391)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~TP~v~~i~al~~~l~~i~~~gGl~~~~~r~~~~a~~l~~~i~~~~~~~~~~~~~~~rS~~ 306 (391)
T Consensus 276 -----------~~~~g~T~~g~pl-a~aaala~L~~i~~~~----l~~~a~~~G~~l~~~L~~l~~~~~~i~--~VRG~G 337 (403)
T PRK05093 276 -----------VGTHGSTYGGNPL-ACAVAEAVFDIINTPE----VLEGVKAREQRFVDGLQKINEKYGVFS--EIRGKG 337 (403)
T ss_pred -----------CCCCCCCCCCCHH-HHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHHHHHHCCCEE--EEEECC
T ss_conf -----------8772658985899-9999999999996344----999999999999999999986289826--665412
Q ss_pred EEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 178-9824731011373456788899999888628287266556767505686158889999999999999999999
Q gi|254780153|r 307 SIC-MKIVDSDIASLDINSQKSFCKSMLSFLEKEEIAYDIGSYRDAPLGLRVWVGVTVEKEDLLLLCDWLRWVFYFQ 382 (391)
Q Consensus 307 ~v~-~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~r~~~~~~RIg~~g~i~~~dv~~L~~aLe~~~~~~ 382 (391)
T Consensus 338 lm~giel~~~~~---------~~a~~i~~~~~~~Gll~~~~g----~n~irl~PPL~it~~eid~~l~~l~~al~eV 401 (403)
T PRK05093 338 LLIGAELNEQYK---------GRARDFLYAAAEEGVMVLVAG----PDVLRFAPSLVIPDADIDEGLARFEKAVAKV 401 (403)
T ss_pred EEEEEEECCCCC---------HHHHHHHHHHHHCCCEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 699999658752---------169999999996892895279----9979997884489999999999999999998